RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 SNX25Q9H3E2 840 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 KCTD10Q9H3F6 313 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 GOLPH3LQ9H4A5 285 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 TRPC7Q9HCX4 862 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 UXTQ9UBK9 157 aaPredicted RBP11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 PILRBQ9UKJ0 227 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 CDH9Q9ULB4 789 aa11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
CHRNA3-205ENST00000559080 ATXN2Q99700 1313 aaKnown RBP11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 TRAV19A0A0A6YYK7 116 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 SGK1O00141 431 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 HCRTO43612 131 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 RHOBTB3O94955 611 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ZNF202O95125 648 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 CKMP06732 381 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ITPKAP23677 461 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ATICP31939 592 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 CASP4P49662 377 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 DPYDQ12882 1025 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 NR1H3Q13133 447 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 KCNB1Q14721 858 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 CCDC142Q17RM4 750 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ZNF699Q32M78 642 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 WDR72Q3MJ13 1102 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 C19orf48Q6RUI8 117 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 SCN4BQ8IWT1 228 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ALLCQ8N6M5 410 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 TTC16Q8NEE8 873 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 MYLPFQ96A32 169 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 DMAC2Q9NW81 257 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 ARHGAP26Q9UNA1 814 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 FRMD4BQ9Y2L6 1034 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 CELSR3Q9NYQ7 3312 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
CHRNA3-205ENST00000559080 A0A0A0MRY4 1105 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 LRRIQ3A6PVS8 624 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 H0Y626 953 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 ADAM23O75077 832 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TACC1O75410 805 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TRIM16O95361 564 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 NFATC1O95644 943 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 STAU1O95793 577 aaKnown RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CST3P01034 146 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CYP17A1P05093 508 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 PDGFRBP09619 1106 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CD59P13987 128 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 ANXA13P27216 316 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 MAGEA11P43364 429 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 KIR2DL1P43626 348 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 MYL6P60660 151 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CYP27A1Q02318 531 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 SCAPQ12770 1279 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 NCOA4Q13772 614 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 SPDYCQ5MJ68 293 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 EMC10Q5UCC4 262 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TDRD10Q5VZ19 366 aaKnown RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 LIMS2Q7Z4I7 341 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 PDZD3Q86UT5 571 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TTC30AQ86WT1 665 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 ADGRG2Q8IZP9 1017 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TXNDC5Q8NBS9 432 aaKnown RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 PARD3BQ8TEW8 1205 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 TMEM174Q8WUU8 243 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 BBC3Q96PG8 261 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 MRPL45Q9BRJ2 306 aaKnown RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CAPN10Q9HC96 672 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 RMND1Q9NWS8 449 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 MAGEC2Q9UBF1 373 aaPredicted RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 NXF1Q9UBU9 619 aaKnown RBP11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 MAPK8IP1Q9UQF2 711 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 KNL1Q8NG31 2342 aa11.92□□□□□ -0.5
CHRNA3-205ENST00000559080 SMG1Q96Q15 3661 aaKnown RBP11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 TP53BP1Q12888 1972 aaPredicted RBP11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 ATP2C2O75185 946 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 ALDH1A2O94788 518 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 KLF8O95600 359 aaPredicted RBP11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 FAM163BP0C2L3 166 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 HDCP19113 662 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 NR2F2P24468 414 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 LMO2P25791 158 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 HOXD12P35452 270 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 TIE1P35590 1138 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 GNL1P36915 607 aaPredicted RBP11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 SLC6A11P48066 632 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 DUOXA1Q1HG43 343 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 COL28A1Q2UY09 1125 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 ZNF667Q5HYK9 610 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 LYSMD4Q5XG99 296 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 FAM171BQ6P995 826 aa11.91□□□□□ -0.5
CHRNA3-205ENST00000559080 VSTM1Q6UX27 236 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms