RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 OR7D4Q8NG98 312 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ZSCAN18Q8TBC5 510 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 FEZF2Q8TBJ5 459 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 SMCR8Q8TEV9 937 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 NEIL1Q96FI4 390 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ZNF274Q96GC6 653 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 UHRF1Q96T88 793 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ACO2Q99798 780 aaKnown RBP6.83□□□□□ -1.32
LRRC28-209ENST00000558861 TEX13BQ9BXU2 312 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 BCO1Q9HAY6 547 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 PCDHB1Q9Y5F3 818 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 DUSP10Q9Y6W6 482 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ZSWIM8A7E2V4 1837 aa6.83□□□□□ -1.32
LRRC28-209ENST00000558861 ASTN1O14525 1302 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CCDC69A6NI79 296 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 ZBTB43O43298 467 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PFKFB2O60825 505 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 ICAM1P05362 532 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CALM1P0DP23 149 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CALM2P0DP24 149 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CALM3P0DP25 149 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 GYPEP15421 78 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 IFNAR1P17181 557 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 BMP7P18075 431 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 SREBF1P36956 1147 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PER3P56645 1201 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 DSC2Q02487 901 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 TARDBPQ13148 414 aaKnown RBP eCLIP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 RIN1Q13671 783 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 GRM3Q14832 879 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 QRICH1Q2TAL8 776 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 LCNL1Q6ZST4 164 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 ADGRE4PQ86SQ3 457 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 GPRC5AQ8NFJ5 357 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PPP1R35Q8TAP8 253 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 MDM1Q8TC05 714 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CD99L2Q8TCZ2 262 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 LRRC37BQ96QE4 947 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PAGR1Q9BTK6 254 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 AGO3Q9H9G7 860 aaKnown RBP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 RAVER2Q9HCJ3 691 aaKnown RBP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 IL23AQ9NPF7 189 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 OAZ3Q9UMX2 235 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CFAP20Q9Y6A4 193 aaKnown RBP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 RANBP2P49792 3224 aaKnown RBP6.82□□□□□ -1.32
LRRC28-209ENST00000558861 CASP8AP2Q9UKL3 1982 aa6.82□□□□□ -1.32
LRRC28-209ENST00000558861 PLXNB2O15031 1838 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 COL11A1P12107 1806 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 LRRC14BA6NHZ5 514 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 NRP1O14786 923 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 ZBTB5O15062 677 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 ALDH2P05091 517 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 HOXC6P09630 235 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 SYN1P17600 705 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 KIF5BP33176 963 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 CRHR1P34998 444 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GNAQP50148 359 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 METAP2P50579 478 aaKnown RBP eCLIP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GRB14Q14449 540 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 PPP2R5BQ15173 497 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 CDC37Q16543 378 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 PRAMEF14Q5SWL7 426 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GJC2Q5T442 439 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 SNRNP48Q6IEG0 339 aaKnown RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GPR142Q7Z601 462 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 PLEKHH3Q7Z736 793 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GPR135Q8IZ08 494 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 ABRAQ8N0Z2 381 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 CAMKK1Q8N5S9 505 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 CTCFLQ8NI51 663 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 CCHCR1Q8TD31 782 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 NUP133Q8WUM0 1156 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 RABGGTAQ92696 567 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GTF3C6Q969F1 213 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 TIFAQ96CG3 184 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 LMF1Q96S06 567 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 PIGSQ96S52 555 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 LZTS2Q9BRK4 669 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 MEGF9Q9H1U4 602 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 C12orf65Q9H3J6 166 aaKnown RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 LANCL2Q9NS86 450 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 TDP1Q9NUW8 608 aa6.81□□□□□ -1.32
LRRC28-209ENST00000558861 RBM28Q9NW13 759 aaKnown RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 GEMIN8Q9NWZ8 242 aaKnown RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-209ENST00000558861 ZNF236Q9UL36 1845 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 hCG_1642624A0A1W2PR95 340 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 ADAMTS3O15072 1205 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 CEP290O15078 2479 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 CDC14BO60729 498 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 ZBED4O75132 1171 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 SLC25A27O95847 323 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 AMY1AP04745 511 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 FDPSP14324 419 aaKnown RBP6.8□□□□□ -1.32
LRRC28-209ENST00000558861 MAPK4P31152 587 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 CNR2P34972 360 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 PSMC4P43686 418 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 PPP2CBP62714 309 aa6.8□□□□□ -1.32
LRRC28-209ENST00000558861 PPP2CAP67775 309 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms