RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 GOLPH3LQ9H4A5 285 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 UNKLQ9H9P5 680 aaKnown RBP3.58□□□□□ -1.84
HERC1-203ENST00000558532 GALNT9Q9HCQ5 603 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 PDE11AQ9HCR9 933 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 PDRG1Q9NUG6 133 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 GNL3LQ9NVN8 582 aaKnown RBP3.58□□□□□ -1.84
HERC1-203ENST00000558532 RNF181Q9P0P0 153 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 HMG20BQ9P0W2 317 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 CTTNBP2NLQ9P2B4 639 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 TUBE1Q9UJT0 475 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 GGA2Q9UJY4 613 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 PACSIN3Q9UKS6 424 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 TPCN1Q9ULQ1 816 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 CDYLQ9Y232 598 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 THRAP3Q9Y2W1 955 aaKnown RBP3.58□□□□□ -1.84
HERC1-203ENST00000558532 NOX1Q9Y5S8 564 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 CYP46A1Q9Y6A2 500 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 EPN1Q9Y6I3 576 aaPredicted RBP3.58□□□□□ -1.84
HERC1-203ENST00000558532 GRIN2DO15399 1336 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 CARMIL3Q8ND23 1372 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 TECPR2O15040 1411 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 LMTK3Q96Q04 1460 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 SLIT1O75093 1534 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 CPS1P31327 1500 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 NRXN3Q9Y4C0 1643 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 PIK3C2AO00443 1686 aa3.58□□□□□ -1.84
HERC1-203ENST00000558532 ARHGEF17Q96PE2 2063 aaPredicted RBP3.58□□□□□ -1.84
HERC1-203ENST00000558532 PNMA6EA0A0J9YXQ4 647 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 A0A1W2PS29 197 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 GOLGA6L4A6NEF3 574 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PRSS29PA6NIE9 313 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 A6NNZ2 444 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 A2ML1A8K2U0 1454 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 BECN2A8MW95 431 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SLC16A6O15403 523 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 AKAP10O43572 662 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 KINO60870 393 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 RTN2O75298 545 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 ERLIN2O94905 339 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SYF2O95926 243 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 RPLP2P05387 115 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 HMGB1P09429 215 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 IFIT2P09913 472 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 C4AP0C0L4 1744 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 C4BP0C0L5 1744 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 FDXRP22570 491 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 RPS6KB1P23443 525 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 AKAP5P24588 427 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CALRP27797 417 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 PSMA5P28066 241 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PRDX5P30044 214 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 HNRNPH1P31943 449 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 MAP2K6P52564 334 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 HK3P52790 923 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SEC24CP53992 1094 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 INHBEP58166 350 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 MXRA7P84157 204 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 TAP1Q03518 808 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 ICA1Q05084 483 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 FOXI1Q12951 378 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 NEDD9Q14511 834 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CASP8Q14790 479 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PGS1Q32NB8 556 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 TUBB8Q3ZCM7 444 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SPDYE7PQ495Y7 208 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PLEKHO1Q53GL0 409 aaPredicted RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 EMC10Q5UCC4 262 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 ECM29Q5VYK3 1845 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 FOXR2Q6PJQ5 311 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 GBP6Q6ZN66 633 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CCDC73Q6ZRK6 1079 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 TMPRSS9Q7Z410 1059 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 ARHGEF25Q86VW2 580 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 RAVER1Q8IY67 606 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 LCORLQ8N3X6 602 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PDPRQ8NCN5 879 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 BICD2Q8TD16 824 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 RUFY2Q8WXA3 655 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 DNAAF4Q8WXU2 420 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 MVB12AQ96EY5 273 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CCDC34Q96HJ3 373 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 LRIG1Q96JA1 1093 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 COQ10AQ96MF6 247 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 JAKMIP1Q96N16 626 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 MED15Q96RN5 788 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 WDR24Q96S15 920 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SH3GL2Q99962 352 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CDHR2Q9BYE9 1310 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 SPEF2Q9C093 1822 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CYP4F11Q9HBI6 524 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 MRPS18AQ9NVS2 196 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 SIDT1Q9NXL6 827 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 VPS18Q9P253 973 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 CDC23Q9UJX2 597 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 ANKRD6Q9Y2G4 727 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 PPP2R2CQ9Y2T4 447 aa3.57□□□□□ -1.84
HERC1-203ENST00000558532 MTO1Q9Y2Z2 717 aaKnown RBP3.57□□□□□ -1.84
HERC1-203ENST00000558532 PCDHA3Q9Y5H8 950 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms