RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ULBP1Q9BZM6 244 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 THG1LQ9NWX6 298 aaKnown RBP13□□□□□ -0.33
SMAD3-205ENST00000558428 OSER1Q9NX31 292 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 NAGPAQ9UK23 515 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 ARHGAP26Q9UNA1 814 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 DAAM1Q9Y4D1 1078 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 CPQQ9Y646 472 aa13□□□□□ -0.33
SMAD3-205ENST00000558428 A0A1B0GTH6 734 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 KRBA1A5PL33 1030 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PRR33A8MZF0 331 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 LEFTY2O00292 366 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PIK3R2O00459 728 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ZBED1O96006 694 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PDGFBP01127 241 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-205ENST00000558428 RALAP11233 206 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 RARGP13631 454 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 KRT9P35527 623 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 GPD2P43304 727 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PSEN1P49768 467 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 USP4Q13107 963 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 MTF1Q14872 753 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ZNF77Q15935 545 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PM20D1Q6GTS8 502 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 CC2D1AQ6P1N0 951 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-205ENST00000558428 HFE2Q6ZVN8 426 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 SCD5Q86SK9 330 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ARHGAP18Q8N392 663 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 RIN3Q8TB24 985 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 NDRG1Q92597 394 aaKnown RBP12.99□□□□□ -0.33
SMAD3-205ENST00000558428 PBXIP1Q96AQ6 731 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 NAP1L5Q96NT1 182 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ARHGEF3Q9NR81 526 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 ST7Q9NRC1 585 aa12.99□□□□□ -0.33
SMAD3-205ENST00000558428 STK25O00506 426 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 GFPT2O94808 682 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 TBX18O95935 607 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 TCF3P15923 654 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 ATP5C1P36542 298 aaKnown RBP12.98□□□□□ -0.33
SMAD3-205ENST00000558428 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMAD3-205ENST00000558428 ZXDBP98169 803 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 FANCCQ00597 558 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 MLF2Q15773 248 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-205ENST00000558428 SLC44A4Q53GD3 710 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 C10orf120Q5SQS8 335 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 IER5LQ5T953 404 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 BMP8AQ7Z5Y6 402 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 TADA2BQ86TJ2 420 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMAD3-205ENST00000558428 PASD1Q8IV76 773 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 CSGALNACT1Q8TDX6 532 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 LRFN3Q9BTN0 628 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 CYLDQ9NQC7 956 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 CNGB3Q9NQW8 809 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMAD3-205ENST00000558428 CLIC5Q9NZA1 410 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 NUDT5Q9UKK9 219 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 PCDHGC3Q9UN70 934 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 COL4A2P08572 1712 aa12.98□□□□□ -0.33
SMAD3-205ENST00000558428 MYOFQ9NZM1 2061 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 ARNTLO00327 626 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 MDM4O15151 490 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 GABBR2O75899 941 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 CYP11B1P15538 503 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 SOX5P35711 763 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 STAT1P42224 750 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 ACADSBP45954 432 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 IFNAR2P48551 515 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 UBASH3AP57075 661 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 JAM2P57087 298 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 DAOAP59103 153 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 PRKCQQ04759 706 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 TNK2Q07912 1038 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 TAF3Q5VWG9 929 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 BTBD8Q5XKL5 378 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 TRIM68Q6AZZ1 485 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 BHLHA9Q7RTU4 235 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 SCML4Q8N228 414 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 STK32AQ8WU08 396 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 SHDQ96IW2 340 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
SMAD3-205ENST00000558428 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
SMAD3-205ENST00000558428 MIS12Q9H081 205 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 PDCL3Q9H2J4 239 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 TRPV5Q9NQA5 729 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
SMAD3-205ENST00000558428 CFAP97Q9P2B7 532 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 CYTH4Q9UIA0 394 aa12.97□□□□□ -0.33
SMAD3-205ENST00000558428 COL4A3Q01955 1670 aa12.96□□□□□ -0.33
SMAD3-205ENST00000558428 MIA3Q5JRA6 1907 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms