RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NAALADL1Q9UQQ1 740 aa4.16□□□□□ -1.74
TDP1-217ENST00000557782 AGAP14A8MT82 685 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 B5MCH6 92 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 KIF28PB7ZC32 967 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 TMEM232C9JQI7 657 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ERAL1O75616 437 aaKnown RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 SCG2P13521 617 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 TNNT1P13805 278 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 PRKCHP24723 683 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 NFKBIAP25963 317 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 BSGP35613 385 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 MRE11P49959 708 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 PTTG1IPP53801 180 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 PRKAG1P54619 331 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 LOXL3P58215 753 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 BPIFB4P59827 614 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ADAM17P78536 824 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 KCNMA1Q12791 1236 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 DCTN2Q13561 401 aaKnown RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 PRICKLE4Q2TBC4 344 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ZNF574Q6ZN55 896 aaPredicted RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 IKBIPQ70UQ0 350 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 STK32CQ86UX6 486 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 CD163Q86VB7 1156 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 RHOT2Q8IXI1 618 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ULK2Q8IYT8 1036 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 CMTM4Q8IZR5 234 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 TTLL6Q8N841 843 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 SMARCC2Q8TAQ2 1214 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ABHD4Q8TB40 342 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 FNIP1Q8TF40 1166 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 SCFD2Q8WU76 684 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ZDHHC12Q96GR4 267 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 EYA3Q99504 573 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 SMOQ99835 787 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 MAK16Q9BXY0 300 aaKnown RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 FTOQ9C0B1 505 aaKnown RBP eCLIP4.15□□□□□ -1.75
TDP1-217ENST00000557782 RNF32Q9H0A6 362 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 INTS2Q9H0H0 1204 aaKnown RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 SLC6A15Q9H2J7 730 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 TAOK3Q9H2K8 898 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 RANBP17Q9H2T7 1088 aaKnown RBP4.15□□□□□ -1.75
TDP1-217ENST00000557782 DBNDD1Q9H9R9 158 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 FSCN3Q9NQT6 498 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 ADAMTS8Q9UP79 889 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 CLCA2Q9UQC9 943 aa4.15□□□□□ -1.75
TDP1-217ENST00000557782 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 CDHR4A6H8M9 788 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 C1QTNF9BB2RNN3 333 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 E9PLN8 166 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 POLRMTO00411 1230 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 CD3EAPO15446 510 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 DHHO43323 396 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 HNRNPRO43390 633 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 DHX16O60231 1041 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 VPS4BO75351 444 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 GJB3O75712 270 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 CER1O95813 267 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 SPARCP09486 303 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 WEE2P0C1S8 567 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 ATP6V1B1P15313 513 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 TM4SF1P30408 202 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 HOXC13P31276 330 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 ACSL1P33121 698 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 HADHAP40939 763 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 EIF2DP41214 584 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 RGS2P41220 211 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 MSH2P43246 934 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 NPEPPSP55786 919 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 LILRA4P59901 499 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 YBX1P67809 324 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 PIGFQ07326 219 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PTP4A2Q12974 167 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PUM1Q14671 1186 aaKnown RBP eCLIP4.14□□□□□ -1.75
TDP1-217ENST00000557782 P3H1Q32P28 736 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 C1orf141Q5JVX7 400 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 CBWD5Q5RIA9 395 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 LCE2CQ5TA81 110 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 DEPDC1Q5TB30 811 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 DENND1BQ6P3S1 775 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 FAM47EQ6ZV65 393 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 SPRED2Q7Z698 418 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 REXO1L1PQ8IX06 675 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 TMEFF1Q8IYR6 380 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 ANKRD53Q8N9V6 530 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 AVL9Q8NBF6 648 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 KYQ8NBH2 561 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 KCTD6Q8NC69 237 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PDPRQ8NCN5 879 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 MBD3L2Q8NHZ7 208 aaPredicted RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 SLC35B2Q8TB61 432 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 TBC1D15Q8TC07 691 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 KIF1BPQ96EK5 621 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 SAAL1Q96ER3 474 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 REXO5Q96IC2 774 aaKnown RBP4.14□□□□□ -1.75
TDP1-217ENST00000557782 HIC2Q96JB3 615 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 KLHL32Q96NJ5 620 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 NOX5Q96PH1 765 aa4.14□□□□□ -1.75
TDP1-217ENST00000557782 PPP1R10Q96QC0 940 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms