RNA–Protein interactions for RNA: ENST00000557755.5

CGRRF1-209, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-209ENST00000557755 RPF1Q9H9Y2 349 aaKnown RBP11.86□□□□□ -0.51
CGRRF1-209ENST00000557755 USP36Q9P275 1121 aaKnown RBP11.86□□□□□ -0.51
CGRRF1-209ENST00000557755 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
CGRRF1-209ENST00000557755 ANKRD6Q9Y2G4 727 aa11.86□□□□□ -0.51
CGRRF1-209ENST00000557755 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
CGRRF1-209ENST00000557755 ICE1Q9Y2F5 2266 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 ZNF840PA6NDX5 716 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 PCDHGA12O60330 932 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 ATP2C2O75185 946 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 RFPL3O75679 317 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 ADRB2P07550 413 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 MYF5P13349 255 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 ACTN2P35609 894 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 KRT2P35908 639 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 ACADVLP49748 655 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 CCT8P50990 548 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 TPMTP51580 245 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 GAD2Q05329 585 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 TMEM132DQ14C87 1099 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 NFE2Q16621 373 aaPredicted RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 INTS6LQ5JSJ4 861 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 CNDP2Q96KP4 475 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 DDX19AQ9NUU7 478 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 L1RE1Q9UN81 338 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 NFE2L3Q9Y4A8 694 aa11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
CGRRF1-209ENST00000557755 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 E2F8A0AVK6 867 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 HOXC11O43248 304 aaPredicted RBP11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 KRT38O76015 456 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 OLFM2O95897 454 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 MBL2P11226 248 aaPredicted RBP11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 BTBD8Q5XKL5 378 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 SDE2Q6IQ49 451 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 ZPBP2Q6X784 338 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 KCNK18Q7Z418 384 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 BICD1Q96G01 975 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 C6orf106Q9H6K1 298 aaPredicted RBP11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 ABCB6Q9NP58 842 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 ITM2CQ9NQX7 267 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 DDX43Q9NXZ2 648 aaKnown RBP11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 DPP3Q9NY33 737 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 TRPM5Q9NZQ8 1165 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 PCDHGA1Q9Y5H4 931 aa11.84□□□□□ -0.51
CGRRF1-209ENST00000557755 PLXNA2O75051 1894 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 KLK10O43240 276 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 CTDNEP1O95476 244 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 LDOC1O95751 146 aaPredicted RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 GP1BBP13224 206 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 AFF3P51826 1226 aaKnown RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 DIEXFQ68CQ4 756 aaKnown RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 GRAMD4Q6IC98 578 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 RINT1Q6NUQ1 792 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 C1orf186Q6ZWK4 172 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 SPATA2LQ8IUW3 424 aaPredicted RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 EXD3Q8N9H8 876 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 CCSER1Q9C0I3 900 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 TM9SF3Q9HD45 589 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 CPSF3Q9UKF6 684 aaKnown RBP11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 PCDHB1Q9Y5F3 818 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
CGRRF1-209ENST00000557755 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 TISP43B9A030 160 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 OGTO15294 1046 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 MPOP05164 745 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 IRF1P10914 325 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 GLDCP23378 1020 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 BDNFP23560 247 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 CTSKP43235 329 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 ACOT2P49753 483 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 PSMC1P62191 440 aaKnown RBP11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 VAC14Q08AM6 782 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 IFRD2Q12894 506 aaPredicted RBP11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 SHBQ15464 509 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 ZNF174Q15697 407 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 BROXQ5VW32 411 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 SLC39A4Q6P5W5 647 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 CPLX2Q6PUV4 134 aaKnown RBP11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 KDM7AQ6ZMT4 941 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 EID2Q8N6I1 236 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 P2RY11Q96G91 374 aa11.82□□□□□ -0.52
CGRRF1-209ENST00000557755 ZNF274Q96GC6 653 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms