RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GCDHQ92947 438 aaPredicted RBP5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 RMDN1Q96DB5 314 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 DHX36Q9H2U1 1008 aaKnown RBP5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 MLXIPQ9HAP2 919 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 CLIC5Q9NZA1 410 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC13A4Q9UKG4 626 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 AFG3L2Q9Y4W6 797 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 PIEZO2Q9H5I5 2752 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 FRYQ5TBA9 3013 aa5.57□□□□□ -1.52
MTHFD1-216ENST00000557539 SMG1Q96Q15 3661 aaKnown RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 POLR3AO14802 1390 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 A0A087WZ62 844 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 A6NCN8 305 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 FCHO1O14526 889 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 TSPAN15O95858 294 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 A1BGP04217 495 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 GRPP07492 148 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 C1QTNF9P0C862 333 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 ATF2P15336 505 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 ALOX15P16050 662 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 LIFRP42702 1097 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 COPAP53621 1224 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 UCP3P55916 312 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 POU6F2P78424 691 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 TOP3AQ13472 1001 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 AKNAD1Q5T1N1 836 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 ARL6IP4Q66PJ3 421 aaKnown RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 C4orf50Q6ZRC1 276 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 GATAD2AQ86YP4 633 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 CPOQ8IVL8 374 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 CCDC117Q8IWD4 279 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 SPPL3Q8TCT6 385 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 SPSB4Q96A44 273 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 EID2BQ96D98 161 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 ERP27Q96DN0 273 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 ZBTB10Q96DT7 871 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 DIRC2Q96SL1 478 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 C11orf84Q9BUA3 381 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 PCDH18Q9HCL0 1135 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 TMEM8AQ9HCN3 771 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 SAYSD1Q9NPB0 183 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 IRAK4Q9NWZ3 460 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 HERC5Q9UII4 1024 aaKnown RBP5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 FEM1BQ9UK73 627 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC45A1Q9Y2W3 748 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 TMX2Q9Y320 296 aa5.56□□□□□ -1.52
MTHFD1-216ENST00000557539 DLEC1Q9Y238 1755 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 A0A087WWL8 130 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ZNF785A8K8V0 405 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 B4E171 279 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 RAB27BO00194 218 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ZZEF1O43149 2961 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 HOXC11O43248 304 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 MTSS1O43312 755 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC43A1O75387 559 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 DNAJB5O75953 348 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 USP1O94782 785 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TOX4O94842 621 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TBX18O95935 607 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 CHGBP05060 677 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ITGA2BP08514 1039 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 BTF3P20290 206 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ADD2P35612 726 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 CASRP41180 1078 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TSPAN7P41732 249 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ETV4P43268 484 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 PAPOLAP51003 745 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 MXRA7P84157 204 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 PCOLCEQ15113 449 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TARBP2Q15633 366 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 FAM26FQ5R3K3 315 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 MFSD14BQ5SR56 506 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 GPATCH4Q5T3I0 446 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 KRT40Q6A162 431 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 CRTC1Q6UUV9 634 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 ZDHHC24Q6UX98 284 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 LARP4Q71RC2 724 aaKnown RBP eCLIP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 B3GNT8Q7Z7M8 397 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 OR5M3Q8NGP4 307 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 AFG1LQ8WV93 481 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 RAPGEF4Q8WZA2 1011 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 CEP95Q96GE4 821 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 MS4A7Q9GZW8 240 aaPredicted RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 KATNBL1Q9H079 304 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 PCDHAC1Q9H158 963 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 NSUN3Q9H649 340 aaKnown RBP5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 TBC1D22BQ9NU19 505 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC23A1Q9UHI7 598 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 SLC45A2Q9UMX9 530 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 PLEKHM1Q9Y4G2 1056 aa5.55□□□□□ -1.52
MTHFD1-216ENST00000557539 MRC1P22897 1456 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CCER2I3L3R5 266 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 M0QYG6 137 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 CYP7B1O75881 506 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 JUPP14923 745 aa5.54□□□□□ -1.52
MTHFD1-216ENST00000557539 ATP5JP18859 108 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms