RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 AKR1B15C9JRZ8 316 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-230ENST00000557427 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 SH3BP5O60239 455 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 STX10O60499 249 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 TUBB4AP04350 444 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 FTH1P19P0C7X4 201 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 ITPKAP23677 461 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 P2RY2P41231 377 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 CDR1P51861 262 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 ALCAMQ13740 583 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 TRIP6Q15654 476 aaKnown RBP13.32□□□□□ -0.28
SHMT2-230ENST00000557427 C9orf57Q5W0N0 161 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 E4F1Q66K89 784 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-230ENST00000557427 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 STXBP4Q6ZWJ1 553 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 LPCAT2Q7L5N7 544 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 USP37Q86T82 979 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 HDDC3Q8N4P3 179 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 CSGALNACT2Q8N6G5 542 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 CD101Q93033 1021 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
SHMT2-230ENST00000557427 ASB7Q9H672 318 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 CAPN10Q9HC96 672 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 PTPRBP23467 1997 aa13.32□□□□□ -0.28
SHMT2-230ENST00000557427 A0A1W2PQC6 194 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 K7EQS6 105 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 M0QZQ0 153 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 PIRO00625 290 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 OPHN1O60890 802 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 FGF19O95750 216 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 CFIP05156 583 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 TNNT1P13805 278 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 ATF6P18850 670 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 GARTP22102 1010 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 HOXD13P35453 343 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 LILRA4P59901 499 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 TFAMQ00059 246 aaKnown RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 ANKRD40Q6AI12 368 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 SLCO6A1Q86UG4 719 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 LURAP1LQ8IV03 231 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 MINDY1Q8N5J2 469 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 FAM84AQ96KN4 292 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 SENP8Q96LD8 212 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 UBL7Q96S82 380 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 BAG1Q99933 345 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
SHMT2-230ENST00000557427 VPS16Q9H269 839 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 SLC39A2Q9NP94 309 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 DERAQ9Y315 318 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
SHMT2-230ENST00000557427 A0A087WV48 116 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 USP27XA6NNY8 438 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 CLIC2O15247 247 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 IL18RAPO95256 599 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 TPM1P09493 284 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 FECHP22830 423 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 WNT7BP56706 349 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 AMPD2Q01433 879 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 CRY1Q16526 586 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 C2orf27AQ580R0 203 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 FAM26FQ5R3K3 315 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 MARCH9Q86YJ5 346 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 EFCAB13Q8IY85 973 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 CCDC33Q8N5R6 958 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 MAB21L3Q8N8X9 362 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 MYRIPQ8NFW9 859 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 ZNF507Q8TCN5 953 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 C16orf45Q96MC5 204 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-230ENST00000557427 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 RBAKQ9NYW8 714 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-230ENST00000557427 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-230ENST00000557427 CITO14578 2027 aa13.3□□□□□ -0.28
SHMT2-230ENST00000557427 ANO9A1A5B4 782 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 TK2O00142 265 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 CYB561D2O14569 222 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 ZSCAN12O43309 604 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 MFAP3LO75121 409 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 GJB3O75712 270 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 KIF20AO95235 890 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 CHRM1P11229 460 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-230ENST00000557427 CDC25CP30307 473 aa13.29□□□□□ -0.28
SHMT2-230ENST00000557427 AARSP49588 968 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms