RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 PTPN1P18031 435 aaKnown RBP10.85□□□□□ -0.67
RDH11-210ENST00000557331 GJB2P29033 226 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 OXTRP30559 389 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 ATICP31939 592 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 USP46P62068 366 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 PSMC1P62191 440 aaKnown RBP10.85□□□□□ -0.67
RDH11-210ENST00000557331 TNNC1P63316 161 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 PLEKHG6Q3KR16 790 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 GRAMD4Q6IC98 578 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CCNI2Q6ZMN8 369 aaPredicted RBP10.85□□□□□ -0.67
RDH11-210ENST00000557331 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 RGL4Q8IZJ4 473 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 PHTF2Q8N3S3 785 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CHCHD4Q8N4Q1 142 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CADM4Q8NFZ8 388 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 SCFD1Q8WVM8 642 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 DNAJC19Q96DA6 116 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CDC6Q99741 560 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 NACA2Q9H009 215 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 FBXO44Q9H4M3 255 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 SMPD4Q9NXE4 827 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 PPP4R2Q9NY27 417 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 CALCOCO1Q9P1Z2 691 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 SMC3Q9UQE7 1217 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 LOC400499M0QZD8 3231 aa10.85□□□□□ -0.67
RDH11-210ENST00000557331 IGHV1OR15-9A0A0B4J2B8 117 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 EIF4E1BA6NMX2 242 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 IDEP14735 1019 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 GABRG2P18507 467 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 PDCP20941 246 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 AP3M2P53677 418 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 AMPD3Q01432 767 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 KDSRQ06136 332 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 KCNA1Q09470 495 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 SCAPQ12770 1279 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 STARD3Q14849 445 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 SF3A1Q15459 793 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 ANO4Q32M45 955 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 C10orf76Q5T2E6 689 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 HTR3DQ70Z44 454 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 TRAPPC11Q7Z392 1133 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 B3GALNT2Q8NCR0 500 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 OR6B3Q8NGW1 331 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 DNASE2BQ8WZ79 361 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 SYAP1Q96A49 352 aaPredicted RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 GABRG3Q99928 467 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 CBWD1Q9BRT8 395 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 DNAI2Q9GZS0 605 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 PCED1AQ9H1Q7 454 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 PANK4Q9NVE7 773 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 IL37Q9NZH6 218 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 CGNQ9P2M7 1197 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 LSM7Q9UK45 103 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 PCDHGB2Q9Y5G2 931 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 SRPRBQ9Y5M8 271 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 MORC2Q9Y6X9 1032 aaPredicted RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 CEP192Q8TEP8 1941 aa10.84□□□□□ -0.67
RDH11-210ENST00000557331 TNRC6BQ9UPQ9 1833 aaKnown RBP10.84□□□□□ -0.67
RDH11-210ENST00000557331 A0A1B0GTW7 788 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 A0A1W2PQF6 199 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 FAM92AA1XBS5 289 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 GOLGA8IPA6NC78 632 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 GOLGA8JA6NMD2 632 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 A8MXQ7 604 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 E9PAM4 449 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 COCHO43405 550 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 SH3BP5O60239 455 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 CACNG3O60359 315 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 GJB3O75712 270 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 CER1O95813 267 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 ZDHHC11BP0C7U3 371 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 TNNI1P19237 187 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 TRPC3Q13507 836 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 KLHDC10Q6PID8 442 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 TADA2BQ86TJ2 420 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 PDZD3Q86UT5 571 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 C12orf40Q86WS4 652 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 NAXDQ8IW45 347 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 GALNT15Q8N3T1 639 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
RDH11-210ENST00000557331 UCMAQ8WVF2 138 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 TMX3Q96JJ7 454 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 HSPA12BQ96MM6 686 aa10.83□□□□□ -0.68
RDH11-210ENST00000557331 DMAP1Q9NPF5 467 aaPredicted RBP10.83□□□□□ -0.68
RDH11-210ENST00000557331 TLR8Q9NR97 1041 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms