RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 NUP93Q8N1F7 819 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 TRIML1Q8N9V2 468 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 GLIS3Q8NEA6 775 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 PDZD8Q8NEN9 1154 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 FBXO32Q969P5 355 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 ERLEC1Q96DZ1 483 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 CAMK1GQ96NX5 476 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
SNX6-209ENST00000557265 HSPBP1Q9NZL4 362 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 PCNX2A6NKB5 2137 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
SNX6-209ENST00000557265 A0A1W2PQD8 194 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 A8MXQ7 604 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 SH3BP5O60239 455 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 RTN3O95197 1032 aaPredicted RBP13.06□□□□□ -0.32
SNX6-209ENST00000557265 SYPP08247 313 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 FAM163BP0C2L3 166 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 DLATP10515 647 aaKnown RBP13.06□□□□□ -0.32
SNX6-209ENST00000557265 STAT6P42226 847 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 TNNC1P63316 161 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 HNRNPDQ14103 355 aaKnown RBP13.06□□□□□ -0.32
SNX6-209ENST00000557265 TRIP6Q15654 476 aaKnown RBP13.06□□□□□ -0.32
SNX6-209ENST00000557265 WDR72Q3MJ13 1102 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 TERB1Q8NA31 727 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 RDH13Q8NBN7 331 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 OVCA2Q8WZ82 227 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 HPS3Q969F9 1004 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 WBP2Q969T9 261 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 KCNK16Q96T55 309 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 ACOX2Q99424 681 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 KIAA1586Q9HCI6 787 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 STARD13Q9Y3M8 1113 aa13.06□□□□□ -0.32
SNX6-209ENST00000557265 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
SNX6-209ENST00000557265 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 WDFY3Q8IZQ1 3526 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 ZNF217O75362 1048 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 IRF1P10914 325 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 TNNI1P19237 187 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 NDUFV2P19404 249 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
SNX6-209ENST00000557265 SCAPQ12770 1279 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 PLEKHG6Q3KR16 790 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 EGFLAMQ63HQ2 1017 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 SDE2Q6IQ49 451 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 C19orf48Q6RUI8 117 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 RGL4Q8IZJ4 473 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 IPO4Q8TEX9 1081 aaKnown RBP13.05□□□□□ -0.32
SNX6-209ENST00000557265 CCDC127Q96BQ5 260 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 CD248Q9HCU0 757 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 NXF1Q9UBU9 619 aaKnown RBP13.05□□□□□ -0.32
SNX6-209ENST00000557265 PCDHB9Q9Y5E1 797 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 MYO16Q9Y6X6 1858 aa13.05□□□□□ -0.32
SNX6-209ENST00000557265 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 A0A087X0B3 334 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 VPS37CA5D8V6 355 aaPredicted RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 HOXD13P35453 343 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 SLC5A3P53794 718 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 SLC14A1Q13336 389 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 SNRNP35Q16560 246 aaKnown RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 GRAMD4Q6IC98 578 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 PNPLA1Q8N8W4 532 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 ZNF419Q96HQ0 510 aaPredicted RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 CGRRF1Q99675 332 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 DUSP9Q99956 384 aaKnown RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 MED10Q9BTT4 135 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 NACA2Q9H009 215 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 SLC6A17Q9H1V8 727 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 FAM124BQ9H5Z6 455 aaPredicted RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 DNAJC17Q9NVM6 304 aaKnown RBP13.04□□□□□ -0.32
SNX6-209ENST00000557265 IL37Q9NZH6 218 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 GMIPQ9P107 970 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 ITPR1Q14643 2758 aa13.04□□□□□ -0.32
SNX6-209ENST00000557265 NEDD8-MDP1E9PL57 170 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 NDUFS2O75306 463 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 GJB3O75712 270 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 FTH1P19P0C7X4 201 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 MAOBP27338 520 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 PGFP49763 221 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 TUBP50607 506 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 MYL6P60660 151 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 TRPC3Q13507 836 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 PSMD6Q15008 389 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 SYCP2LQ5T4T6 812 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 FAM173BQ6P4H8 233 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 TOGARAM2Q6ZUX3 1019 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 PAQR9Q6ZVX9 377 aa13.03□□□□□ -0.32
SNX6-209ENST00000557265 HTR3DQ70Z44 454 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms