RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MORC2Q9Y6X9 1032 aaPredicted RBP9.28□□□□□ -0.92
VRK1-206ENST00000557222 TCHHQ07283 1943 aa9.28□□□□□ -0.92
VRK1-206ENST00000557222 ZZEF1O43149 2961 aa9.27□□□□□ -0.92
VRK1-206ENST00000557222 SERTM1A2A2V5 107 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 BCLAF3A2AJT9 711 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 TISP43B9A030 160 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 KHNYNO15037 678 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 TADA3O75528 432 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 NFATC1O95644 943 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 ITGB3P05106 788 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 ARSAP15289 507 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 CYP2F1P24903 491 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 POLR2BP30876 1174 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 MPLP40238 635 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 IFNAR2P48551 515 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 TFAMQ00059 246 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 MYO1EQ12965 1108 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 DDR2Q16832 855 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 SH3PXD2AQ5TCZ1 1133 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 SFR1Q86XK3 245 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 CSGALNACT2Q8N6G5 542 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 BEND7Q8N7W2 519 aaPredicted RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 TSEN2Q8NCE0 465 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 FAM213AQ9BRX8 229 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 FBRSL1Q9HCM7 1045 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 RBAKQ9NYW8 714 aaPredicted RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 GCNT4Q9P109 453 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 GTF3C4Q9UKN8 822 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 ARHGAP26Q9UNA1 814 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 MAGED2Q9UNF1 606 aaPredicted RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 SRPRBQ9Y5M8 271 aaKnown RBP9.27□□□□□ -0.93
VRK1-206ENST00000557222 ZFHX4Q86UP3 3567 aa9.27□□□□□ -0.93
VRK1-206ENST00000557222 FRMD3A2A2Y4 597 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 MYMKA6NI61 221 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 KCNK5O95279 499 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 CAVIN2O95810 425 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 CKMP06732 381 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 HDCP19113 662 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 PDCP20941 246 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 PXNP49023 591 aaPredicted RBP9.26□□□□□ -0.93
VRK1-206ENST00000557222 GPR15P49685 360 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 GRIN1Q05586 938 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 DMC1Q14565 340 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 KCNB1Q14721 858 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 HSF5Q4G112 596 aaPredicted RBP9.26□□□□□ -0.93
VRK1-206ENST00000557222 USP39Q53GS9 565 aaKnown RBP9.26□□□□□ -0.93
VRK1-206ENST00000557222 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 RRAGBQ5VZM2 374 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 RNF43Q68DV7 783 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 CCDC73Q6ZRK6 1079 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 DYMQ7RTS9 669 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 ADGRF2Q8IZF7 708 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 RPLP0P6Q8NHW5 317 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 RIN3Q8TB24 985 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 SH3RF2Q8TEC5 729 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 EDARADDQ8WWZ3 215 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 EPSTI1Q96J88 318 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 KIAA1586Q9HCI6 787 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 MAGEC2Q9UBF1 373 aaPredicted RBP9.26□□□□□ -0.93
VRK1-206ENST00000557222 CDH9Q9ULB4 789 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 R3HCC1Q9Y3T6 440 aaKnown RBP9.26□□□□□ -0.93
VRK1-206ENST00000557222 SNX9Q9Y5X1 595 aa9.26□□□□□ -0.93
VRK1-206ENST00000557222 OBSL1O75147 1896 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 GON4LQ3T8J9 2241 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 IGF2RP11717 2491 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 ATRXP46100 2492 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 ABCA7Q8IZY2 2146 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 EML5Q05BV3 1969 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 A0A0A0MRY4 1105 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 SLC9A3R1O14745 358 aaPredicted RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 GCNT3O95395 438 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 CD33P20138 364 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 HOXC13P31276 330 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 EIF2DP41214 584 aaKnown RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 DPP6P42658 865 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 SLC7A9P82251 487 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 MRPS21P82921 87 aaKnown RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 KCNA1Q09470 495 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 SPDYCQ5MJ68 293 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 PMS2CLQ68D20 193 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 STXBP4Q6ZWJ1 553 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 RASSF3Q86WH2 238 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 SYCP3Q8IZU3 236 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 GPD1LQ8N335 351 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 TSTD1Q8NFU3 115 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 USP33Q8TEY7 942 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 CNOT6LQ96LI5 555 aaKnown RBP9.25□□□□□ -0.93
VRK1-206ENST00000557222 HHIPQ96QV1 700 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 CYP2S1Q96SQ9 504 aa9.25□□□□□ -0.93
VRK1-206ENST00000557222 TTLL2Q9BWV7 592 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms