RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KRT6AP02538 564 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 HMGCRP04035 888 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 KRT6BP04259 564 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 POLR2EP19388 210 aaKnown RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 CDC25CP30307 473 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 KRT6CP48668 564 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ICE2Q659A1 982 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 CATSPERGQ6ZRH7 1159 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ZNF248Q8NDW4 579 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 NDUFS2O75306 463 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 VPS4BO75351 444 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 HPGDP15428 266 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 PPP2R1BP30154 601 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 HSPA13P48723 471 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 METTL16Q86W50 562 aaKnown RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 BRSK2Q8IWQ3 736 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ACER1Q8TDN7 264 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 CPA5Q8WXQ8 436 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SOX13Q9UN79 622 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 GIT1Q9Y2X7 761 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 PQBP1O60828 265 aaKnown RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 RAMP2O60895 175 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 EIF2S1P05198 315 aaKnown RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 CLCN3P51790 818 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 KLHL35Q6PF15 583 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ABCC13Q9NSE7 274 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SEPT3Q9UH03 358 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 ARL2BPQ9Y2Y0 163 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 ZSCAN9O15535 394 aaPredicted RBP12.36□□□□□ -0.43
NEK9-210ENST00000557026 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 GCATO75600 419 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 SULT2A1Q06520 285 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 KIZQ2M2Z5 673 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 C1orf54Q8WWF1 131 aa12.36□□□□□ -0.43
NEK9-210ENST00000557026 COL5A2P05997 1499 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 O00370 1275 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 MEFVO15553 781 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 ERN1O75460 977 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 CYP11B1P15538 503 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 MARC1Q5VT66 337 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ZDHHC20Q5W0Z9 365 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 SPATA4Q8NEY3 305 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ATL1Q8WXF7 558 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ZNF669Q96BR6 464 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 DACH2Q96NX9 599 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 SYBUQ9NX95 663 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 TMEM114B3SHH9 223 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 GLP2RO95838 553 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 APOA1P02647 267 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 LCA5Q86VQ0 697 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 C17orf53Q8N3J3 647 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 CIPCQ9C0C6 399 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ASAH2Q9NR71 780 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 FAM47DPA6NHR8 397 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 C2CD2LO14523 706 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 SERPINA4P29622 427 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 RTP1P59025 263 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 MRPS6P82932 125 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 TFDP3Q5H9I0 405 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 C6orf10Q5SRN2 563 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 AGGF1Q8N302 714 aaeCLIP12.35□□□□□ -0.43
NEK9-210ENST00000557026 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 COPG1Q9Y678 874 aaKnown RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 TCF3P15923 654 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 TRPC1P48995 793 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
NEK9-210ENST00000557026 PAGE2BQ5JRK9 111 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ZNF720Q7Z2F6 126 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 INTS13Q9NVM9 706 aa12.35□□□□□ -0.43
NEK9-210ENST00000557026 CAPN15O75808 1086 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 PRLRP16471 622 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 PRIM2P49643 509 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 FXR1P51114 621 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK9-210ENST00000557026 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 PLCL1Q15111 1095 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 CYB5D1Q6P9G0 228 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 USP45Q70EL2 814 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 USP33Q8TEY7 942 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 FDXACB1Q9BRP7 624 aaPredicted RBP12.34□□□□□ -0.43
NEK9-210ENST00000557026 SCN3BQ9NY72 215 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
NEK9-210ENST00000557026 URADA6NGE7 173 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms