RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RAB27BO00194 218 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 ACKR2O00590 384 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 CCP110O43303 1012 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 NDST3O95803 873 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 A1BGP04217 495 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 SRGNP10124 158 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 GATA3P23771 443 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 ITGA8P53708 1063 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 LMOD3Q0VAK6 560 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 ARHGEF7Q14155 803 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 JAKMIP3Q5VZ66 844 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 FCRLBQ6BAA4 426 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 KRT28Q7Z3Y7 464 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 RAPGEF4Q8WZA2 1011 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 RUBCNQ92622 972 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 C18orf8Q96DM3 657 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 KLHL32Q96NJ5 620 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 MED15Q96RN5 788 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 FAM167BQ9BTA0 163 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 DHX36Q9H2U1 1008 aaKnown RBP5.03□□□□□ -1.6
PRPF39-210ENST00000556718 TMEM8AQ9HCN3 771 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 RRN3Q9NYV6 651 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 GRHPRQ9UBQ7 328 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 ST3GAL5Q9UNP4 418 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 SHOC2Q9UQ13 582 aa5.03□□□□□ -1.6
PRPF39-210ENST00000556718 LRRFIP2Q9Y608 721 aaKnown RBP5.03□□□□□ -1.6
PRPF39-210ENST00000556718 AQP7P3A6NL99 342 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 LINC00473A8K010 186 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 PROM1O43490 865 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 KIF20AO95235 890 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 CHRM2P08172 466 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 BTF3P20290 206 aaKnown RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 CPT1AP50416 773 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 SSBP2P81877 361 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 TFF2Q03403 129 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 KRT17Q04695 432 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF844Q08AG5 666 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 GALNT1Q10472 559 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 TBX2Q13207 712 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 IQCB1Q15051 598 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 MAPRE1Q15691 268 aaKnown RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 SLC4A8Q2Y0W8 1093 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 ANKRD45Q5TZF3 282 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 KIAA1614Q5VZ46 1190 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 C11orf87Q6NUJ2 197 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 GLIS1Q8NBF1 620 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 TMIEQ8NEW7 156 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 TOR1AIP2Q8NFQ8 470 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 IPO4Q8TEX9 1081 aaKnown RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 PRPF18Q99633 342 aaKnown RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 SORBS1Q9BX66 1292 aaKnown RBP5.02□□□□□ -1.61
PRPF39-210ENST00000556718 TLR10Q9BXR5 811 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 ZHX3Q9H4I2 956 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 XPNPEP3Q9NQH7 507 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 SAGE1Q9NXZ1 904 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 HESX1Q9UBX0 185 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 WNT6Q9Y6F9 365 aa5.02□□□□□ -1.61
PRPF39-210ENST00000556718 A0A1W2PS29 197 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 CCDC151A5D8V7 595 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 POLRMTO00411 1230 aaKnown RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 TRIM38O00635 465 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 PIP5K1BO14986 540 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ORC4O43929 436 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 COQ9O75208 318 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ITGA2BP08514 1039 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 GABRB3P28472 473 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 EIF2B5Q13144 721 aaKnown RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 POSTNQ15063 836 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 MAPKAPK3Q16644 382 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 TXNRD1Q16881 649 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ADCK5Q3MIX3 580 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 PLA1AQ53H76 456 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 MTX3Q5HYI7 312 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 FAXCQ5TGI0 409 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF626Q68DY1 528 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 KRTAP5-11Q6L8G4 156 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 KLHL17Q6TDP4 642 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 CYP26C1Q6V0L0 522 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF782Q6ZMW2 699 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 PPP1R32Q7Z5V6 425 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 GAS2L3Q86XJ1 694 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 CLASRPQ8N2M8 674 aaKnown RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 USP13Q92995 863 aaPredicted RBP5.01□□□□□ -1.61
PRPF39-210ENST00000556718 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 TTYH3Q9C0H2 523 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ZCWPW1Q9H0M4 648 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 FAM83DQ9H4H8 585 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 AS3MTQ9HBK9 375 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 AGAP1Q9UPQ3 857 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 CDYLQ9Y232 598 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 KAT6AQ92794 2004 aa5.01□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF804BA4D1E1 1349 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 RRN3P2A6NIE6 340 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 AQP12BA6NM10 295 aa5□□□□□ -1.61
PRPF39-210ENST00000556718 VWC2LB2RUY7 222 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms