RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 SNX30Q5VWJ9 437 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 TRIM65Q6PJ69 517 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 SCD5Q86SK9 330 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 MAML2Q8IZL2 1156 aaPredicted RBP10.93□□□□□ -0.66
SNX6-208ENST00000556712 CPA6Q8N4T0 437 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 ANKRD52Q8NB46 1076 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 NDRG1Q92597 394 aaKnown RBP10.93□□□□□ -0.66
SNX6-208ENST00000556712 CLDN23Q96B33 292 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 ULBP1Q9BZM6 244 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 NACA2Q9H009 215 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 ECT2Q9H8V3 914 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 LMAN1LQ9HAT1 526 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
SNX6-208ENST00000556712 ACP6Q9NPH0 428 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 TMEM63CQ9P1W3 806 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 HESX1Q9UBX0 185 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 NAGPAQ9UK23 515 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 NFE2L3Q9Y4A8 694 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 PIK3R2O00459 728 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 PES1O00541 588 aaKnown RBP10.92□□□□□ -0.66
SNX6-208ENST00000556712 XPO1O14980 1071 aaKnown RBP10.92□□□□□ -0.66
SNX6-208ENST00000556712 CYP17A1P05093 508 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 PAEPP09466 180 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 PNMA6AP0CW24 399 aaPredicted RBP10.92□□□□□ -0.66
SNX6-208ENST00000556712 RARGP13631 454 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 PRKCSHP14314 528 aaPredicted RBP10.92□□□□□ -0.66
SNX6-208ENST00000556712 GJA4P35212 333 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 RGS7P49802 495 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 TKTL1P51854 596 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 ADIGQ0VDE8 80 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 MTAPQ13126 283 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 GAS6Q14393 721 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 STX1AQ16623 288 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 ARHGAP44Q17R89 818 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 CCDC183Q5T5S1 534 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 TSSK4Q6SA08 328 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 GBP6Q6ZN66 633 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 CCDC186Q7Z3E2 898 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 C1orf210Q8IVY1 113 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 FAM114A1Q8IWE2 563 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 MSANTD3Q96H12 275 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 TUBGCP2Q9BSJ2 902 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 CHRDQ9H2X0 955 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 FBRSL1Q9HCM7 1045 aaKnown RBP10.92□□□□□ -0.66
SNX6-208ENST00000556712 SIX2Q9NPC8 291 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
SNX6-208ENST00000556712 TAB2Q9NYJ8 693 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.92□□□□□ -0.66
SNX6-208ENST00000556712 SH3BP1Q9Y3L3 701 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 USP3Q9Y6I4 520 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 ATG2BQ96BY7 2078 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
SNX6-208ENST00000556712 BECN2A8MW95 431 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 NCAM2O15394 837 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 LAMTOR5O43504 91 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 NFATC1O95644 943 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 EGFP01133 1207 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 SETSIPP0DME0 302 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 LCP1P13796 627 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 PON1P27169 355 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 HOXC13P31276 330 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 MAGEA9P43362 315 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 RPS9P46781 194 aaKnown RBP10.91□□□□□ -0.66
SNX6-208ENST00000556712 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
SNX6-208ENST00000556712 SLC8A3P57103 927 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 CCINQ13939 588 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 EXOC3L4Q17RC7 722 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 GAB4Q2WGN9 574 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 VWA3BQ502W6 1294 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 RAB41Q5JT25 222 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 C10orf120Q5SQS8 335 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 FSTL4Q6MZW2 842 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 PKN3Q6P5Z2 889 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 SASS6Q6UVJ0 657 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 LCLAT1Q6UWP7 414 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 BBS7Q8IWZ6 715 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 SECISBP2LQ93073 1101 aaKnown RBP10.91□□□□□ -0.66
SNX6-208ENST00000556712 NELL2Q99435 816 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 KLF16Q9BXK1 252 aaPredicted RBP10.91□□□□□ -0.66
SNX6-208ENST00000556712 NDST4Q9H3R1 872 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 LRRC4Q9HBW1 653 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 C2orf42Q9NWW7 574 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 RASAL2Q9UJF2 1139 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 R4GN57 208 aa10.91□□□□□ -0.66
SNX6-208ENST00000556712 MYO15AQ9UKN7 3530 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 DMDP11532 3685 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 GTPBP10A4D1E9 387 aaKnown RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 ANTXRLA6NF34 631 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 GREM1O60565 184 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 GABBR2O75899 941 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 LETM1O95202 739 aaPredicted RBP10.9□□□□□ -0.66
SNX6-208ENST00000556712 ZBED1O96006 694 aa10.9□□□□□ -0.66
SNX6-208ENST00000556712 SP9P0CG40 484 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms