RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 OLFML1Q6UWY5 402 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 RSRC2Q7L4I2 434 aaKnown RBP13.13□□□□□ -0.31
ABCD4-225ENST00000556517 GPR149Q86SP6 731 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 C3orf20Q8ND61 904 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 RNF139Q8WU17 664 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 HLA-CQ95604 372 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
ABCD4-225ENST00000556517 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 HCFC1R1Q9NWW0 138 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 GMIPQ9P107 970 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 CLEC1BQ9P126 229 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
ABCD4-225ENST00000556517 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 TJP2Q9UDY2 1190 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 CNOT8Q9UFF9 292 aaKnown RBP13.13□□□□□ -0.31
ABCD4-225ENST00000556517 CD207Q9UJ71 328 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 PCDHA13Q9Y5I0 950 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 PTPRDP23468 1912 aa13.13□□□□□ -0.31
ABCD4-225ENST00000556517 PATJQ8NI35 1801 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 YJEFN3A6XGL0 299 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 E7ENQ6 273 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 PAPLNO95428 1278 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 LTFP02788 710 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 TMEM253P0C7T8 217 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 KRT3P12035 628 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 KCNA5P22460 613 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 RRM1P23921 792 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 MTHFRP42898 656 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 EPHA5P54756 1037 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 GALCP54803 685 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 GSCP56915 257 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 PTP4A2Q12974 167 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 SYCE2Q6PIF2 218 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 SLC26A9Q7LBE3 791 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 NECTIN4Q96NY8 510 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 THAP2Q9H0W7 228 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 SLITRK6Q9H5Y7 841 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 UBE2ZQ9H832 354 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 POPDC2Q9HBU9 364 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 ZNF334Q9HCZ1 680 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 CHORDC1Q9UHD1 332 aaPredicted RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 ZMYM5Q9UJ78 669 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
ABCD4-225ENST00000556517 CLUHO75153 1309 aa13.12□□□□□ -0.31
ABCD4-225ENST00000556517 A0A1W2PQH9 124 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 ZNF840PA6NDX5 716 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 NCAM1P13591 858 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 FSHRP23945 695 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 DDX6P26196 483 aaKnown RBP eCLIP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 TUBP50607 506 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 DLX2Q07687 328 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 KIF5AQ12840 1032 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 CLUL1Q15846 466 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 BSPRYQ5W0U4 402 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 RHOT2Q8IXI1 618 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 MSLNLQ96KJ4 702 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 TRPC7Q9HCX4 862 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
ABCD4-225ENST00000556517 CTTNBP2NLQ9P2B4 639 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 STAP1Q9ULZ2 295 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 COG5Q9UP83 839 aa13.11□□□□□ -0.31
ABCD4-225ENST00000556517 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 SIGLEC16A6NMB1 481 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 H3BQ06 376 aaPredicted RBP13.1□□□□□ -0.31
ABCD4-225ENST00000556517 ZNF263O14978 683 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 DAB1O75553 588 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 GRAP2O75791 330 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 GABBR2O75899 941 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 F11P03951 625 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 RARGP13631 454 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 LTBRP36941 435 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 VAV2P52735 878 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 NTHL1P78549 312 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 C10orf120Q5SQS8 335 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
ABCD4-225ENST00000556517 SNX30Q5VWJ9 437 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms