RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CC2D1BQ5T0F9 858 aaKnown RBP4.14□□□□□ -1.75
SCFD1-218ENST00000556256 DENND2CQ68D51 928 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 GAS2L3Q86XJ1 694 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 BPIFB1Q8TDL5 484 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 WBP1Q96G27 269 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 BRINP2Q9C0B6 783 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 MGAT4CQ9UBM8 478 aa4.14□□□□□ -1.75
SCFD1-218ENST00000556256 FOXN3O00409 490 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-218ENST00000556256 SPRY2O43597 315 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 DTNBO60941 627 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 THP07101 528 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 PGGT1BP53609 377 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 ITKQ08881 620 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 MTMR1Q13613 665 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 CCNIQ14094 377 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 PLA1AQ53H76 456 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 CCDC157Q569K6 752 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 ZNF793Q6ZN11 406 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 B4GALNT4Q76KP1 1039 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 WFIKKN2Q8TEU8 576 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 GPATCH3Q96I76 525 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 SCNM1Q9BWG6 230 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 SPC25Q9HBM1 224 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 SARS2Q9NP81 518 aaKnown RBP4.13□□□□□ -1.75
SCFD1-218ENST00000556256 GJB4Q9NTQ9 266 aa4.13□□□□□ -1.75
SCFD1-218ENST00000556256 TRIP12Q14669 1992 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-218ENST00000556256 ZNF814B7Z6K7 855 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 CTIFO43310 598 aaKnown RBP4.12□□□□□ -1.75
SCFD1-218ENST00000556256 NDUFB8O95169 186 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 EPN2O95208 641 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 SYF2O95926 243 aaKnown RBP4.12□□□□□ -1.75
SCFD1-218ENST00000556256 ARRB2P32121 409 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 BCAT1P54687 386 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 CFHR3Q02985 330 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 CERCAMQ5T4B2 595 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 RNF187Q5TA31 235 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-218ENST00000556256 DCAF12L1Q5VU92 463 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 NR2C2APQ86WQ0 139 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-218ENST00000556256 SLC15A4Q8N697 577 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 DNAJC5GQ8N7S2 189 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 NUDCD2Q8WVJ2 157 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 SLC13A1Q9BZW2 595 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 ARHGAP39Q9C0H5 1083 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 TMEM45AQ9NWC5 275 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 USP22Q9UPT9 525 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 MED16Q9Y2X0 877 aa4.12□□□□□ -1.75
SCFD1-218ENST00000556256 ACOT8O14734 319 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 CD63P08962 238 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 POU2F2P09086 479 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 TACR3P29371 465 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 AMPD3Q01432 767 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 NFATC4Q14934 902 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 MFSD13AQ14CX5 517 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 PTPN21Q16825 1174 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 FAM110CQ1W6H9 321 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 FBXL22Q6P050 247 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 RFX8Q6ZV50 586 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 TMEM255BQ8WV15 326 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 KAZALD1Q96I82 304 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 NTPCRQ9BSD7 190 aaKnown RBP4.11□□□□□ -1.75
SCFD1-218ENST00000556256 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 MYLK2Q9H1R3 596 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 ERRFI1Q9UJM3 462 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-218ENST00000556256 COG5Q9UP83 839 aa4.11□□□□□ -1.75
SCFD1-218ENST00000556256 A0A087WWL8 130 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 A0A087WYN8 130 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 TMEM272A0A1B0GTI8 110 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 C2CD4BA6NLJ0 364 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 INPPL1O15357 1258 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 TMPRSS11DO60235 418 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-218ENST00000556256 HOXB2P14652 356 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 NCLP19338 710 aaKnown RBP4.1□□□□□ -1.75
SCFD1-218ENST00000556256 PRKAR1BP31321 381 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 ALDH7A1P49419 539 aaKnown RBP4.1□□□□□ -1.75
SCFD1-218ENST00000556256 HILS1P60008 231 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 PTPROQ16827 1216 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 PFKFB3Q16875 520 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-218ENST00000556256 PGS1Q32NB8 556 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 SPARTQ8N0X7 666 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 EDC3Q96F86 508 aaKnown RBP4.1□□□□□ -1.75
SCFD1-218ENST00000556256 WDYHV1Q96HA8 205 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 MRGPRX1Q96LB2 322 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 SLITRK1Q96PX8 696 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 CPA4Q9UI42 421 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 TNKSO95271 1327 aa4.1□□□□□ -1.75
SCFD1-218ENST00000556256 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 NTN3O00634 580 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-218ENST00000556256 TLX3O43711 291 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-218ENST00000556256 CCND1P24385 295 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 UQCRC1P31930 480 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 GUCY2FP51841 1108 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 TIRAPP58753 221 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 PDXDC1Q6P996 788 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 ZNF329Q86UD4 541 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 COL23A1Q86Y22 540 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-218ENST00000556256 SPATA2LQ8IUW3 424 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-218ENST00000556256 IQCF1Q8N6M8 205 aa4.09□□□□□ -1.75
SCFD1-218ENST00000556256 C12orf76Q8N812 135 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms