RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 APPL2Q8NEU8 664 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 MAGEC3Q8TD91 643 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 ZNF317Q96PQ6 595 aaPredicted RBP15.43■□□□□ 0.06
CUX1-215ENST00000556210 CNPY3Q9BT09 278 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 LGALS2P05162 132 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 MYL2P10916 166 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 SPDYCQ5MJ68 293 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 EMC10Q5UCC4 262 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 PLEKHA7Q6IQ23 1121 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
CUX1-215ENST00000556210 CKAP2Q8WWK9 683 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 SGF29Q96ES7 293 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 THTPAQ9BU02 230 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 ST6GALNAC4Q9H4F1 302 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 TXNRD2Q9NNW7 524 aa15.43■□□□□ 0.06
CUX1-215ENST00000556210 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 DFFAO00273 331 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 TPH1P17752 444 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 IL1R2P27930 398 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 BEX3Q00994 111 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 POU5F1Q01860 360 aaKnown RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 POU5F1BQ06416 359 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 MPP2Q14168 576 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 FNBP1LQ5T0N5 605 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 FAM183BPQ6ZVS7 135 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 PHF13Q86YI8 300 aaPredicted RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 B2RBV5 119 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 OPHN1O60890 802 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 IL18RAPO95256 599 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 SLC25A27O95847 323 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 TGFB3P10600 412 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 VDRP11473 427 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 ARL2P36404 184 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 DPY19L2P1Q6NXN4 242 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 PIGWQ7Z7B1 504 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 SLC25A41Q8N5S1 370 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 FITM2Q8N6M3 262 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 ALLCQ8N6M5 410 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 SLC2A14Q8TDB8 520 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 ZNF75CPQ92670 426 aaPredicted RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 FAM136AQ96C01 138 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 VCPIP1Q96JH7 1222 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 TSR3Q9UJK0 312 aaKnown RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 NDC80O14777 642 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 EIF4BP23588 611 aaKnown RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 OAZ1P54368 228 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 RAB6CQ53S08 254 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 RAB6CQ9H0N0 254 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 FBXO6Q9NRD1 293 aaPredicted RBP15.42■□□□□ 0.06
CUX1-215ENST00000556210 BTAF1O14981 1849 aa15.42■□□□□ 0.06
CUX1-215ENST00000556210 MAP3K7O43318 606 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 NCAM1P13591 858 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 SERPINB3P29508 390 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 MCL1Q07820 350 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 PPP1R26Q5T8A7 1209 aaPredicted RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 GPR20Q99678 358 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 ELOVL4Q9GZR5 314 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 MAFBQ9Y5Q3 323 aaPredicted RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 LSM8O95777 96 aaKnown RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 CYP2F1P24903 491 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 LAMC2Q13753 1193 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 ISLR2Q6UXK2 745 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 FAM228AQ86W67 206 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 AP4E1Q9UPM8 1137 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 AHDC1Q5TGY3 1603 aaPredicted RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 CLDN5O00501 218 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 XPOTO43592 962 aaKnown RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 HSPA4LO95757 839 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 CYP1A1P04798 512 aaPredicted RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 SOX11P35716 441 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 PGM1P36871 562 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 MAP3K7CLP57077 242 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 RPL10AP62906 217 aaKnown RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 C1orf146Q5VVC0 180 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 KCNT2Q6UVM3 1135 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 RIOX2Q8IUF8 465 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 CELF6Q96J87 481 aaKnown RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 PAK5Q9P286 719 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 TLK1Q9UKI8 766 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 BARX2Q9UMQ3 279 aaPredicted RBP15.41■□□□□ 0.06
CUX1-215ENST00000556210 NHSL1Q5SYE7 1610 aa15.41■□□□□ 0.06
CUX1-215ENST00000556210 SIGLEC16A6NMB1 481 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 NVLO15381 856 aaKnown RBP15.4■□□□□ 0.06
CUX1-215ENST00000556210 EDN1P05305 212 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
CUX1-215ENST00000556210 KCNA4P22459 653 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 GLRBP48167 497 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 DEUP1Q05D60 604 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 GRIK4Q16099 956 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 SENP1Q9P0U3 644 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 GOLGA8CPA6NN73 597 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 MAGEB2O15479 319 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 FOXN2P32314 431 aa15.4■□□□□ 0.06
CUX1-215ENST00000556210 CCNHP51946 323 aaPredicted RBP15.4■□□□□ 0.06
CUX1-215ENST00000556210 WDR75Q8IWA0 830 aaKnown RBP15.4■□□□□ 0.06
CUX1-215ENST00000556210 ZNF669Q96BR6 464 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms