RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SH3RF2Q8TEC5 729 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ELMO3Q96BJ8 720 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 CHFRQ96EP1 664 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 MRGPRX2Q96LB1 330 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 P2RY13Q9BPV8 354 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 DPEP3Q9H4B8 488 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 ECT2Q9H8V3 914 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 FBRSL1Q9HCM7 1045 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 TRPM5Q9NZQ8 1165 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 CHMP5Q9NZZ3 219 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 CGNQ9P2M7 1197 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 CDV3Q9UKY7 258 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 SLC8A2Q9UPR5 921 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 MYO18AQ92614 2054 aaKnown RBP7.13□□□□□ -1.27
PSEN1-216ENST00000556066 FRYQ5TBA9 3013 aa7.13□□□□□ -1.27
PSEN1-216ENST00000556066 THADAQ6YHU6 1953 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 A0A1B0GVL5 298 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 TRDMT1O14717 391 aaKnown RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ATG13O75143 517 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 TACC1O75410 805 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 RETP07949 1114 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SLFN14P0C7P3 912 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 PFKFB1P16118 471 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ATICP31939 592 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 GJA4P35212 333 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 PDE6CP51160 858 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 GALK1P51570 392 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ATXN1P54253 815 aaKnown RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 CDH8P55286 799 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 MCCD1P59942 119 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SKOR1P84550 965 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 LMNB2Q03252 620 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 STK4Q13043 487 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF77Q15935 545 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 BMT2Q1RMZ1 405 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF699Q32M78 642 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 TDRD10Q5VZ19 366 aaKnown RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SCARA5Q6ZMJ2 495 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 B3GALNT2Q8NCR0 500 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 GOLGA5Q8TBA6 731 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 OSCP1Q8WVF1 389 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ATP2A3Q93084 1043 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SYAP1Q96A49 352 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 EXOC4Q96A65 974 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 PAGE5Q96GU1 130 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 CHAMP1Q96JM3 812 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SPATA17Q96L03 361 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 MED10Q9BTT4 135 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF518BQ9C0D4 1074 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ELOVL4Q9GZR5 314 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 LINC00597Q9H2U6 94 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SMYD3Q9H7B4 428 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 PARD6AQ9NPB6 346 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 POLR3BQ9NW08 1133 aaPredicted RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 SMPD4Q9NXE4 827 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 EHD2Q9NZN4 543 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 GCNT4Q9P109 453 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 RCOR1Q9UKL0 485 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 NME7Q9Y5B8 376 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.12□□□□□ -1.27
PSEN1-216ENST00000556066 ABCA7Q8IZY2 2146 aa7.12□□□□□ -1.27
PSEN1-216ENST00000556066 NUP205Q92621 2012 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 ATP8B3O60423 1300 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF840PA6NDX5 716 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 LRRIQ3A6PVS8 624 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-216ENST00000556066 PRR5-ARHGAP8B1AHC4 643 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 J3QL48 77 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 LEFTY2O00292 366 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 KLRC4O43908 158 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 RPP40O75818 363 aaKnown RBP7.11□□□□□ -1.27
PSEN1-216ENST00000556066 PAPSS2O95340 614 aaPredicted RBP7.11□□□□□ -1.27
PSEN1-216ENST00000556066 NR3C1P04150 777 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 CCDC192P0DO97 292 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 DRD1P21728 446 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 SDHBP21912 280 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 TGM1P22735 817 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 CNR2P34972 360 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 CACNA2D1P54289 1103 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 NOP14P78316 857 aaKnown RBP7.11□□□□□ -1.27
PSEN1-216ENST00000556066 DLG4P78352 724 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 KRT85P78386 507 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 ARHGAP8P85298 464 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 TAF10Q12962 218 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 USP4Q13107 963 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 NCOA4Q13772 614 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 AGERQ15109 404 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 EML3Q32P44 896 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 ZNF667Q5HYK9 610 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 CEP135Q66GS9 1140 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 WDR5BQ86VZ2 330 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 C12orf56Q8IXR9 622 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 KIAA0895Q8NCT3 520 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 RPLP0P6Q8NHW5 317 aa7.11□□□□□ -1.27
PSEN1-216ENST00000556066 PLEKHO2Q8TD55 490 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms