RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 ADAM33Q9BZ11 813 aa17.97■□□□□ 0.47
XRCC3-215ENST00000555964 XYLT2Q9H1B5 865 aa17.97■□□□□ 0.47
XRCC3-215ENST00000555964 FBXO44Q9H4M3 255 aa17.97■□□□□ 0.47
XRCC3-215ENST00000555964 NME7Q9Y5B8 376 aa17.97■□□□□ 0.47
XRCC3-215ENST00000555964 CACNA1GO43497 2377 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 SCAMP3O14828 347 aaKnown RBP17.96■□□□□ 0.47
XRCC3-215ENST00000555964 HNRNPLP14866 589 aaKnown RBP eCLIP17.96■□□□□ 0.47
XRCC3-215ENST00000555964 RDXP35241 583 aaKnown RBP17.96■□□□□ 0.47
XRCC3-215ENST00000555964 KNOP1Q1ED39 458 aaKnown RBP17.96■□□□□ 0.47
XRCC3-215ENST00000555964 ANO4Q32M45 955 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 MAP7D1Q3KQU3 841 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 SDE2Q6IQ49 451 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 SLC23A3Q6PIS1 610 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 ARMCX6Q7L4S7 300 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 TMEFF1Q8IYR6 380 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 TERB1Q8NA31 727 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 RLN3Q8WXF3 142 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 SPHK2Q9NRA0 654 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 KRT82Q9NSB4 513 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 TMEM30AQ9NV96 361 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 TFIP11Q9UBB9 837 aaKnown RBP17.96■□□□□ 0.47
XRCC3-215ENST00000555964 CACNA1EQ15878 2313 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 CHD6Q8TD26 2715 aa17.96■□□□□ 0.47
XRCC3-215ENST00000555964 PVALEFA0A1B0GWK0 134 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 ADAM23O75077 832 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 TULP3O75386 442 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 AP1G2O75843 785 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 CHRM1P11229 460 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 PDIA4P13667 645 aaKnown RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 EHHADHQ08426 723 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 DUOXA1Q1HG43 343 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 ETFBKMTQ8IXQ9 262 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 PHTF2Q8N3S3 785 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 HDDC3Q8N4P3 179 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 KDF1Q8NAX2 398 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 XPO6Q96QU8 1125 aaKnown RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 TLR8Q9NR97 1041 aaKnown RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 FAM13BQ9NYF5 915 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 IL37Q9NZH6 218 aa17.95■□□□□ 0.46
XRCC3-215ENST00000555964 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 LSM7Q9UK45 103 aaKnown RBP17.95■□□□□ 0.46
XRCC3-215ENST00000555964 FAM92AA1XBS5 289 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 ZNF217O75362 1048 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 ZDHHC11BP0C7U3 371 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 HOXB2P14652 356 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 ENGP17813 658 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 NTSR1P30989 418 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 PTGER3P43115 390 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 MAPK8P45983 427 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 RPL6Q02878 288 aaKnown RBP17.94■□□□□ 0.46
XRCC3-215ENST00000555964 NCOA4Q13772 614 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 EMC10Q5UCC4 262 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 PEAR1Q5VY43 1037 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-215ENST00000555964 GRAMD4Q6IC98 578 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 SFTPA1Q8IWL2 248 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 BBS7Q8IWZ6 715 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 DEFB124Q8NES8 71 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 SCAMP5Q8TAC9 235 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 ZNF516Q92618 1163 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 KCNK16Q96T55 309 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 DNAI2Q9GZS0 605 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 CCSER2Q9H7U1 834 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.94■□□□□ 0.46
XRCC3-215ENST00000555964 GMIPQ9P107 970 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 MBD1Q9UIS9 605 aaPredicted RBP17.94■□□□□ 0.46
XRCC3-215ENST00000555964 PILRBQ9UKJ0 227 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 STARD13Q9Y3M8 1113 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 IGF2RP11717 2491 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 ADAMTS9Q9P2N4 1935 aa17.94■□□□□ 0.46
XRCC3-215ENST00000555964 UPK3BL1B0FP48 263 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 C1QTNF9BB2RNN3 333 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 UPK3BL2E5RIL1 263 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
XRCC3-215ENST00000555964 TLR5O60602 858 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 RPN1P04843 607 aaKnown RBP17.93■□□□□ 0.46
XRCC3-215ENST00000555964 CFIP05156 583 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 C1QTNF9P0C862 333 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
XRCC3-215ENST00000555964 MESP2Q0VG99 397 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 HNRNPDQ14103 355 aaKnown RBP17.93■□□□□ 0.46
XRCC3-215ENST00000555964 SCARA5Q6ZMJ2 495 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 NAT16Q8N8M0 369 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 TAF4BQ92750 862 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 DNAJC17Q9NVM6 304 aaKnown RBP17.93■□□□□ 0.46
XRCC3-215ENST00000555964 WDR35Q9P2L0 1181 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 ZMIZ1Q9ULJ6 1067 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 SLC6A14Q9UN76 642 aa17.93■□□□□ 0.46
XRCC3-215ENST00000555964 LAMA1P25391 3075 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 ANTXRLA6NF34 631 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 H0Y626 953 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 K7ELQ4 463 aaPredicted RBP17.92■□□□□ 0.46
XRCC3-215ENST00000555964 OPHN1O60890 802 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 TRIM16O95361 564 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 SERPINF2P08697 491 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 CDH8P55286 799 aa17.92■□□□□ 0.46
XRCC3-215ENST00000555964 CLDN10P78369 228 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms