RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 SMAP1Q8IYB5 467 aaPredicted RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 CCDC33Q8N5R6 958 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 C19orf47Q8N9M1 422 aaKnown RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 ZSWIM2Q8NEG5 633 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 RIN3Q8TB24 985 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 CHAC2Q8WUX2 184 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 ZNF669Q96BR6 464 aaPredicted RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 CCDC51Q96ER9 411 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 MFSD3Q96ES6 412 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 ZNF419Q96HQ0 510 aaPredicted RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 NLRP4Q96MN2 994 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 GSX2Q9BZM3 304 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 BHLHE41Q9C0J9 482 aaPredicted RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 CRISPLD1Q9H336 500 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 TIMMDC1Q9NPL8 285 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 THG1LQ9NWX6 298 aaKnown RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 GEMIN8Q9NWZ8 242 aaKnown RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 BCCIPQ9P287 314 aaKnown RBP eCLIP6.19□□□□□ -1.42
NEK9-207ENST00000555763 PCDHA6Q9UN73 950 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 PCDHA8Q9Y5H6 950 aa6.19□□□□□ -1.42
NEK9-207ENST00000555763 DIDO1Q9BTC0 2240 aaKnown RBP6.19□□□□□ -1.42
NEK9-207ENST00000555763 RP1P56715 2156 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 NYNRINQ9P2P1 1898 aaKnown RBP6.18□□□□□ -1.42
NEK9-207ENST00000555763 A0A096LPE4 126 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 A0A1W2PPZ6 126 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 SPDYE3A6NKU9 549 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 SGK1O00141 431 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 BPNT1O95861 308 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 PSAPP07602 524 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 C1SP09871 688 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 SNRPBP14678 240 aaKnown RBP6.18□□□□□ -1.42
NEK9-207ENST00000555763 RHOQP17081 205 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 IGFBP6P24592 240 aaPredicted RBP6.18□□□□□ -1.42
NEK9-207ENST00000555763 DCTP40126 519 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 MRPS21P82921 87 aaKnown RBP6.18□□□□□ -1.42
NEK9-207ENST00000555763 HYAL2Q12891 473 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 IGFBP7Q16270 282 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 HLA-BQ31612 363 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 GPR158Q5T848 1215 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 IL27RAQ6UWB1 636 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 NIPA1Q7RTP0 329 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 LYSMD3Q7Z3D4 306 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 SRGAP1Q7Z6B7 1085 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
NEK9-207ENST00000555763 LINC00528Q8N1L1 170 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 CEP120Q8N960 986 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 ENGASEQ8NFI3 743 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 SPATA20Q8TB22 786 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 FRAT1Q92837 279 aaPredicted RBP6.18□□□□□ -1.42
NEK9-207ENST00000555763 NINJ1Q92982 152 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 RUBCNLQ9H714 662 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 GPAMQ9HCL2 828 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 FTSJ1Q9UET6 329 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 MAFFQ9ULX9 164 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 NFE2L3Q9Y4A8 694 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 YIPF1Q9Y548 306 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 PCDHA10Q9Y5I2 948 aa6.18□□□□□ -1.42
NEK9-207ENST00000555763 A0A1W2PQH9 124 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 TCRBV21S2A2A0A5A6 115 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 PTGESO14684 152 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ZNF213O14771 459 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 PAPSS1O43252 624 aaPredicted RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 PCDHGA12O60330 932 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 TSPAN1O60635 241 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ADAM23O75077 832 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 FAM153BP0C7A2 387 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 MYCLP1P12525 358 aaPredicted RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 BMP6P22004 513 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 AKAP5P24588 427 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 AXLP30530 894 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SOX18P35713 384 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ACADVLP49748 655 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 DNM2P50570 870 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ERVPABLB-1P60509 514 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 PTH1RQ03431 593 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SEC23AQ15436 765 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 UGCGQ16739 394 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 HSF5Q4G112 596 aaPredicted RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 NOTUMQ6P988 496 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 CD300LGQ6UXG3 332 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ITPRIPQ8IWB1 547 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SIRT2Q8IXJ6 389 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SRRM1Q8IYB3 904 aaKnown RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 CPA6Q8N4T0 437 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 ZCCHC9Q8N567 271 aaKnown RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 ALLCQ8N6M5 410 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 DCBLD1Q8N8Z6 715 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 IL17RCQ8NAC3 791 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 TXNDC5Q8NBS9 432 aaKnown RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SLC7A3Q8WY07 619 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 RFFLQ8WZ73 363 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 DNASE2BQ8WZ79 361 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SPOCK3Q9BQ16 436 aa6.17□□□□□ -1.42
NEK9-207ENST00000555763 SMG9Q9H0W8 520 aaKnown RBP6.17□□□□□ -1.42
NEK9-207ENST00000555763 TASP1Q9H6P5 420 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms