RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 HAPLN1P10915 354 aaPredicted RBP12.18□□□□□ -0.46
ABCD4-222ENST00000555617 CIITAP33076 1130 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 ARL2P36404 184 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 COPAP53621 1224 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 ANTXR2P58335 489 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 PSMC5P62195 406 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 KLRB1Q12918 225 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 MYBPC2Q14324 1141 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 SMTNL2Q2TAL5 461 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 TMC6Q7Z403 805 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 C14orf80Q86SX3 495 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 LRRTM3Q86VH5 581 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 TMPRSS6Q8IU80 811 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 ABHD17AQ96GS6 310 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 HSFX1Q9UBD0 423 aa12.18□□□□□ -0.46
ABCD4-222ENST00000555617 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 MARCKSP29966 332 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-222ENST00000555617 OXTRP30559 389 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 HSPA4P34932 840 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 DAB2P98082 770 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 TFDP1Q14186 410 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-222ENST00000555617 CXXC5Q7LFL8 322 aaKnown RBP12.17□□□□□ -0.46
ABCD4-222ENST00000555617 ZNF276Q8N554 614 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 CTCFLQ8NI51 663 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-222ENST00000555617 ARRDC3Q96B67 414 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 PCED1AQ9H1Q7 454 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 GSX1Q9H4S2 264 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-222ENST00000555617 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 TUBGCP4Q9UGJ1 667 aa12.17□□□□□ -0.46
ABCD4-222ENST00000555617 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
ABCD4-222ENST00000555617 A0A1W2PR77 199 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 LIPCP11150 499 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 TUFMP49411 452 aaKnown RBP12.16□□□□□ -0.46
ABCD4-222ENST00000555617 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
ABCD4-222ENST00000555617 SLC25A45Q8N413 288 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 SIPA1Q96FS4 1042 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 DEC1Q9P2X7 70 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 KCND3Q9UK17 655 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 ACSL6Q9UKU0 697 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 PPM1HQ9ULR3 514 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 TP53TG5Q9Y2B4 290 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 STON1Q9Y6Q2 735 aa12.16□□□□□ -0.46
ABCD4-222ENST00000555617 ADH1CP00326 375 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 NFICP08651 508 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 GIMD1P0DJR0 217 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
ABCD4-222ENST00000555617 RACK1P63244 317 aaKnown RBP12.15□□□□□ -0.46
ABCD4-222ENST00000555617 FUT2Q10981 343 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 OVOS1Q6IE37 1185 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 SDE2Q6IQ49 451 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 PRR7Q8TB68 274 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 CPT1CQ8TCG5 803 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 IGDCC4Q8TDY8 1250 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 MAP3K14Q99558 947 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 SMPD4Q9NXE4 827 aa12.15□□□□□ -0.46
ABCD4-222ENST00000555617 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.47
ABCD4-222ENST00000555617 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 CKMT1AP12532 417 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 HGFP14210 728 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 HDCP19113 662 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 RPL9P32969 192 aaKnown RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 RXRGP48443 463 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 OSTNP61366 133 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 FAM187BQ17R55 369 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 LACTB2Q53H82 288 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 TMPRSS9Q7Z410 1059 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 ZFAND4Q86XD8 727 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 JAMLQ86YT9 394 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 ZSCAN1Q8NBB4 408 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 WDR36Q8NI36 951 aaKnown RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 RNF38Q9H0F5 515 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 ZCWPW1Q9H0M4 648 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 TMLHEQ9NVH6 421 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 UCKL1Q9NWZ5 548 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 ABI2Q9NYB9 513 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-222ENST00000555617 DAAM1Q9Y4D1 1078 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 PCDHGA7Q9Y5G6 932 aa12.14□□□□□ -0.47
ABCD4-222ENST00000555617 CNTNAP5Q8WYK1 1306 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 PPEF2O14830 753 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 YKT6O15498 198 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 HOXC11O43248 304 aaPredicted RBP12.13□□□□□ -0.47
ABCD4-222ENST00000555617 DDAH1O94760 285 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 NOL4O94818 638 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 SEMA4FO95754 770 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 MLLT3P42568 568 aaPredicted RBP12.13□□□□□ -0.47
ABCD4-222ENST00000555617 NXPH1P58417 271 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 KCNB1Q14721 858 aa12.13□□□□□ -0.47
ABCD4-222ENST00000555617 SAFBQ15424 915 aaKnown RBP eCLIP12.13□□□□□ -0.47
ABCD4-222ENST00000555617 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms