RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TMEM120AQ9BXJ8 343 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 INO80BQ9C086 356 aaPredicted RBP16.83■□□□□ 0.28
TUBB3-209ENST00000555609 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 DCTN4Q9UJW0 460 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 A0A0G2JMZ2 1700 aa16.83■□□□□ 0.28
TUBB3-209ENST00000555609 A0A0G2JND7 137 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 LACTBL1A8MY62 500 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 I3L4J1 428 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 GOLGA8RI6L899 631 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 APOL1O14791 398 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 GSC2O15499 205 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 CXCL8P10145 99 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PYGBP11216 843 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 ACADSP16219 412 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PDGFRAP16234 1089 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 ATP6V1C1P21283 382 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PHKA2P46019 1235 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 SERPINB9P50453 376 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 CDH8P55286 799 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 TBCCQ15814 346 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 EEF1DP3Q658K8 133 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 LRRC71Q8N4P6 559 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PLD5Q8N7P1 536 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■■□□□ 11.9
TUBB3-209ENST00000555609 HEXIM2Q96MH2 286 aaKnown RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 FAM111AQ96PZ2 611 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 CADM1Q9BY67 442 aaKnown RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 SMYD3Q9H7B4 428 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 ITGA11Q9UKX5 1188 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PLLPQ9Y342 182 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 TTLL3Q9Y4R7 772 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 GYG2O15488 501 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 SMNDC1O75940 238 aaKnown RBP eCLIP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 KRT38O76015 456 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 C1QAP02745 245 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 STAG3L1P0CL83 205 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 ZFXP17010 805 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 OSBPP22059 807 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 YWHAZP63104 245 aaKnown RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 SLC9A4Q6AI14 798 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 CYP4V2Q6ZWL3 525 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 CDKL3Q8IVW4 592 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PTPRN2Q92932 1015 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 PEBP4Q96S96 227 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 ZNF670Q9BS34 389 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-209ENST00000555609 RAB6BQ9NRW1 208 aa16.82■□□□□ 0.28
TUBB3-209ENST00000555609 A8MXQ7 604 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 MDM4O15151 490 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 BIRC5O15392 142 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ITGB3P05106 788 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 NFICP08651 508 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 GM2AP17900 193 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 CNTFP26441 200 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 RBP5P82980 135 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 TAF5Q15542 800 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ZNF484Q5JVG2 852 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 STXBP5Q5T5C0 1151 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 TTC17Q96AE7 1141 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 OXNAD1Q96HP4 312 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 NLRP4Q96MN2 994 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 SRPK1Q96SB4 655 aaKnown RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 SIKE1Q9BRV8 207 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 GBA2Q9HCG7 927 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ARL8BQ9NVJ2 186 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 ZC3H7BQ9UGR2 993 aaKnown RBP16.81■□□□□ 0.28
TUBB3-209ENST00000555609 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
TUBB3-209ENST00000555609 TRIM49D1C9J1S8 452 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 CLGNO14967 610 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 CAPN15O75808 1086 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 ZBED1O96006 694 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 APOEP02649 317 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 TPSB2P20231 275 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 BGNP21810 368 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 PSMC4P43686 418 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 BCAR1P56945 870 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 MRPS35P82673 323 aaKnown RBP16.8■□□□□ 0.28
TUBB3-209ENST00000555609 OVGP1Q12889 678 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 TPSAB1Q15661 275 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 JADE1Q6IE81 842 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 EFCAB12Q6NXP0 572 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 TIFABQ6ZNK6 161 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 ZC3H18Q86VM9 953 aaKnown RBP16.8■□□□□ 0.28
TUBB3-209ENST00000555609 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 VPS52Q8N1B4 723 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 HPDLQ96IR7 371 aa16.8■□□□□ 0.28
TUBB3-209ENST00000555609 MIPEPQ99797 713 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms