RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SH3BP1Q9Y3L3 701 aa12.74□□□□□ -0.37
SRP54-206ENST00000555317 A0A1W2PQH9 124 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 ARNTLO00327 626 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 THAP12O43422 761 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 NFATC1O95644 943 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 OLFM2O95897 454 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 ZBED1O96006 694 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 ZDHHC11BP0C7U3 371 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RARGP13631 454 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 TCF3P15923 654 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 GNA15P30679 374 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 ATP5C1P36542 298 aaKnown RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 MAGEA9P43362 315 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 ZNF132P52740 706 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 MLLT6P55198 1093 aaPredicted RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 ADIGQ0VDE8 80 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 NR1H3Q13133 447 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RUNX3Q13761 415 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RAPGEF1Q13905 1077 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 KRT31Q15323 416 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 CNGA2Q16280 664 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 MIIPQ5JXC2 388 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 C10orf120Q5SQS8 335 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 IER5LQ5T953 404 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 TRIM68Q6AZZ1 485 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 GJB7Q6PEY0 223 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RALGPS2Q86X27 583 aaPredicted RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 AOPEPQ8N6M6 819 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 TFAP2BQ92481 460 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 PCMTD1Q96MG8 357 aaPredicted RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 FAM83CQ9BQN1 747 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 DDX23Q9BUQ8 820 aaKnown RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 OSBPL6Q9BZF3 934 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RNF38Q9H0F5 515 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 VPS16Q9H269 839 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 RAPGEFL1Q9UHV5 662 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
SRP54-206ENST00000555317 DNAJC12Q9UKB3 198 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 WNT6Q9Y6F9 365 aa12.73□□□□□ -0.37
SRP54-206ENST00000555317 COL4A2P08572 1712 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SMTNL1A8MU46 457 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 BECN2A8MW95 431 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SPECC1L-ADORA2AF8WAN1 911 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
SRP54-206ENST00000555317 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
SRP54-206ENST00000555317 PI15O43692 258 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 IRF1P10914 325 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 LCP1P13796 627 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 CTHP32929 405 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SOX9P48436 509 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 PTPN5P54829 565 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 APBA1Q02410 837 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 LRRC32Q14392 662 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SKOR2Q2VWA4 1001 aaPredicted RBP12.72□□□□□ -0.37
SRP54-206ENST00000555317 RAB41Q5JT25 222 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 CCDC105Q8IYK2 499 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 KIAA1958Q8N8K9 716 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 DTWD2Q8NBA8 298 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SECISBP2LQ93073 1101 aaKnown RBP12.72□□□□□ -0.37
SRP54-206ENST00000555317 IRF2BPLQ9H1B7 796 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 CYLDQ9NQC7 956 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 TBC1D14Q9P2M4 693 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 CNTN6Q9UQ52 1028 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 USP3Q9Y6I4 520 aa12.72□□□□□ -0.37
SRP54-206ENST00000555317 SYCE3A1L190 88 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 CALCAP01258 141 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 ARSAP15289 507 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 TARSP26639 723 aaKnown RBP12.71□□□□□ -0.37
SRP54-206ENST00000555317 RGS7P49802 495 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 BPIFB4P59827 614 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 YWHAGP61981 247 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRP54-206ENST00000555317 TPM4P67936 248 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 PTK2Q05397 1052 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 BTBD8Q5XKL5 378 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 RIN3Q8TB24 985 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 KCTD13Q8WZ19 329 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 SHC3Q92529 594 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 BPIFA3Q9BQP9 254 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 ULBP1Q9BZM6 244 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 PDCL3Q9H2J4 239 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 ECT2Q9H8V3 914 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 SIX2Q9NPC8 291 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 HPS4Q9NQG7 708 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 CNGB3Q9NQW8 809 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 ST7Q9NRC1 585 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRP54-206ENST00000555317 SPATA6Q9NWH7 488 aaPredicted RBP12.71□□□□□ -0.37
SRP54-206ENST00000555317 CLIC5Q9NZA1 410 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 RASAL2Q9UJF2 1139 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
SRP54-206ENST00000555317 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
SRP54-206ENST00000555317 COL4A3Q01955 1670 aa12.7□□□□□ -0.38
SRP54-206ENST00000555317 CACNA1IQ9P0X4 2223 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms