RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.71□□□□□ -0.377e-7■□□□□ 10.8
ARHGEF40-206ENST00000555232 NRCAMQ92823 1304 aa12.71□□□□□ -0.37
ARHGEF40-206ENST00000555232 SOAT2O75908 522 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 IRX1P78414 480 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 SREBF2Q12772 1141 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 EFEMP1Q12805 493 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 CHADLQ6NUI6 762 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 PDZD4Q76G19 769 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 GIPC2Q8TF65 315 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 LGMNQ99538 433 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 SENP6Q9GZR1 1112 aaPredicted RBP12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 RNF208Q9H0X6 261 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 ASB7Q9H672 318 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 IPPQ9Y573 584 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 A0A1B0GUL6 1792 aa12.71□□□□□ -0.38
ARHGEF40-206ENST00000555232 COPEO14579 308 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 NDC80O14777 642 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 JCHAINP01591 159 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 HOXC6P09630 235 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CRYMQ14894 314 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 MCUR1Q96AQ8 359 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CNPY3Q9BT09 278 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 WDCPQ9H6R7 721 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 ATP11BQ9Y2G3 1177 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 BUD23O43709 281 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 MMP8P22894 467 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 ICAM3P32942 547 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 PDCD7Q8N8D1 485 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 ST13P5Q8NFI4 369 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 SH3TC2Q8TF17 1288 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 PTPN18Q99952 460 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 GPR88Q9GZN0 384 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 TRDMT1O14717 391 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CYP2F1P24903 491 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 FNTAP49354 379 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CLCNKBP51801 687 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 RAD23BP54727 409 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC12A1Q13621 1099 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 DCAF4L1Q3SXM0 396 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CYB5D1Q6P9G0 228 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 LRRC34Q8IZ02 419 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 CDKL2Q92772 493 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 KLHL29Q96CT2 875 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
ARHGEF40-206ENST00000555232 MDM4O15151 490 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CYP1A2P05177 515 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SOX11P35716 441 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 KCNA10Q16322 511 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 DDR2Q16832 855 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 FAM171A1Q5VUB5 890 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCDC117Q8IWD4 279 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 C3orf20Q8ND61 904 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 EXD1Q8NHP7 514 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ATP2A3Q93084 1043 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 TRPV6Q9H1D0 765 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 RSAD1Q9HA92 442 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 GDF3Q9NR23 364 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 MYO18AQ92614 2054 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 PAPPAQ13219 1627 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ARHGAP42A6NI28 874 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SUN1O94901 812 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 FECHP22830 423 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 MCL1Q07820 350 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 OVOS1Q6IE37 1185 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SDCBP2Q9H190 292 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 NPHS2Q9NP85 383 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 MYADML2A6NDP7 307 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 KBTBD13C9JR72 458 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 LPXNO60711 386 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 FSBPO95073 299 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SPATA31D3P0C874 917 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 TROVE2P10155 538 aaKnown RBP eCLIP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 DARSP14868 501 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 GOT1P17174 413 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 GBP1P32455 592 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ELK3P41970 407 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 KCNT2Q6UVM3 1135 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SPATA31D4Q6ZUB0 917 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 C12orf56Q8IXR9 622 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC4A11Q8NBS3 891 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 PPP4R1Q8TF05 950 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZMAT2Q96NC0 199 aaKnown RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 IFT122Q9HBG6 1241 aa12.69□□□□□ -0.38
ARHGEF40-206ENST00000555232 LRP5O75197 1615 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms