RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FAM156AQ8NDB6 213 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 MPP4Q96JB8 637 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 SGCZQ96LD1 299 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 SH2D3AQ9BRG2 576 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 PRSS22Q9GZN4 317 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 TRMT13Q9NUP7 481 aaKnown RBP6.22□□□□□ -1.41
VRK1-203ENST00000555067 SAGE1Q9NXZ1 904 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 GABRQQ9UN88 632 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 ZNF521Q96K83 1311 aa6.22□□□□□ -1.41
VRK1-203ENST00000555067 PQBP1O60828 265 aaKnown RBP6.21□□□□□ -1.42
VRK1-203ENST00000555067 PRKCBP05771 671 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 MMP13P45452 471 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 GEMIN4P57678 1058 aaKnown RBP6.21□□□□□ -1.42
VRK1-203ENST00000555067 RAB1AP62820 205 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 MYO1EQ12965 1108 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 KCTD2Q14681 263 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 ELF2Q15723 593 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 KIRREL2Q6UWL6 708 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 GRAMD1CQ8IYS0 662 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 C8orf58Q8NAV2 365 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 OSCP1Q8WVF1 389 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 CCDC138Q96M89 665 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 TBCBQ99426 244 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 MACROD1Q9BQ69 325 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 PIH1D1Q9NWS0 290 aaKnown RBP6.21□□□□□ -1.42
VRK1-203ENST00000555067 PCDHGB6Q9Y5F9 930 aa6.21□□□□□ -1.42
VRK1-203ENST00000555067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.21□□□□□ -1.42
VRK1-203ENST00000555067 DYTNA2CJ06 578 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 POC1B-GALNT4F8VUJ3 575 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 USP1O94782 785 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 HRGP04196 525 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 CSF1RP07333 972 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 CHRM5P08912 532 aaPredicted RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 CASP2P42575 452 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 TM4SF4P48230 202 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 SLC11A2P49281 568 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 UCP3P55916 312 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 FGL2Q14314 439 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 PUM3Q15397 648 aaKnown RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 MGAT5BQ3V5L5 792 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 ZNF517Q6ZMY9 492 aaPredicted RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 CCDC149Q6ZUS6 474 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 OVCH2Q7RTZ1 564 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 MYLK4Q86YV6 388 aaPredicted RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 GALNT4Q8N4A0 578 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 CELF5Q8N6W0 485 aaKnown RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 PPHLN1Q8NEY8 458 aaKnown RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 RITA1Q96K30 269 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 MRGPRX1Q96LB2 322 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 C5orf34Q96MH7 638 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 SNX18Q96RF0 628 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 MESP1Q9BRJ9 268 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 THAP7Q9BT49 309 aaPredicted RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 CRB3Q9BUF7 120 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 CXorf36Q9H7Y0 433 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 FAM204AQ9H8W3 233 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 ARMT1Q9H993 441 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 TUBA8Q9NY65 449 aaPredicted RBP6.2□□□□□ -1.42
VRK1-203ENST00000555067 CPA4Q9UI42 421 aa6.2□□□□□ -1.42
VRK1-203ENST00000555067 CYP2D7A0A087X1C5 515 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 A0A088AWK7 358 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 SMIM35A0A1B0GVV1 85 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 UBE2Q2LH0YL09 131 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 hCG_1984214I3L0E3 225 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 TIMM44O43615 452 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 TOP3BO95985 862 aaKnown RBP6.19□□□□□ -1.42
VRK1-203ENST00000555067 AGR2O95994 175 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 KRT17Q04695 432 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 DEPDC1Q5TB30 811 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 CCDC174Q6PII3 467 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 SLC2A7Q6PXP3 512 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 LDHAL6AQ6ZMR3 332 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 TERB1Q8NA31 727 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 C1orf131Q8NDD1 294 aaKnown RBP6.19□□□□□ -1.42
VRK1-203ENST00000555067 PLBD2Q8NHP8 589 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 PPP1R35Q8TAP8 253 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 DIS3LQ8TF46 1054 aaKnown RBP6.19□□□□□ -1.42
VRK1-203ENST00000555067 SKA1Q96BD8 255 aa6.19□□□□□ -1.42
VRK1-203ENST00000555067 MRPS17Q9Y2R5 130 aaKnown RBP6.19□□□□□ -1.42
VRK1-203ENST00000555067 PPEF2O14830 753 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 RNASEH2AO75792 299 aaKnown RBP6.18□□□□□ -1.42
VRK1-203ENST00000555067 NTN1O95631 604 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
VRK1-203ENST00000555067 CCKBRP32239 447 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 PLCD1P51178 756 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 FOXG1P55316 489 aaPredicted RBP6.18□□□□□ -1.42
VRK1-203ENST00000555067 KIAA0753Q2KHM9 967 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 JAKMIP3Q5VZ66 844 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 LMBRD2Q68DH5 695 aaPredicted RBP6.18□□□□□ -1.42
VRK1-203ENST00000555067 FCRL6Q6DN72 434 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 MIS18BP1Q6P0N0 1132 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 DENND1CQ8IV53 801 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 WACQ9BTA9 647 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 DPCDQ9BVM2 203 aaPredicted RBP6.18□□□□□ -1.42
VRK1-203ENST00000555067 APOL5Q9BWW9 433 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 VPS16Q9H269 839 aa6.18□□□□□ -1.42
VRK1-203ENST00000555067 A0A087WWL8 130 aa6.17□□□□□ -1.42
VRK1-203ENST00000555067 PRSS47A8MTI9 375 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms