RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
SYNE3-203ENST00000554873 RBP3P10745 1247 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 MAPK4P31152 587 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 ALDH1A3P47895 512 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 PEX3P56589 373 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 CNGA3Q16281 694 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
SYNE3-203ENST00000554873 RABGAP1LQ5R372 815 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 KRT39Q6A163 491 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 PAOXQ6QHF9 649 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
SYNE3-203ENST00000554873 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 PCDHGB4Q9UN71 923 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 TMX2Q9Y320 296 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 PCDHGB5Q9Y5G0 923 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
SYNE3-203ENST00000554873 CRTAMO95727 393 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 TFPTP0C1Z6 253 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 PHBP35232 272 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 CENPCQ03188 943 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 LPCAT2Q7L5N7 544 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 SHKBP1Q8TBC3 707 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 STARD8Q92502 1023 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 CNBD2Q96M20 576 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 HAUS8Q9BT25 410 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 CCDC106Q9BWC9 280 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 C12orf65Q9H3J6 166 aaKnown RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 TPK1Q9H3S4 243 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 TOPORSQ9NS56 1045 aaPredicted RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 ANKRD31Q8N7Z5 1873 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 TBC1D12O60347 775 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 THRAP10827 490 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 ARPC4P59998 168 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 PDIA2Q13087 525 aaKnown RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 ANKDD1AQ495B1 522 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 POU5F2Q8N7G0 328 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 TAS1R2Q8TE23 839 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 GPATCH1Q9BRR8 931 aaKnown RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 KLC2Q9H0B6 622 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 WWP1Q9H0M0 922 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 SMYD3Q9H7B4 428 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 LIN28AQ9H9Z2 209 aaKnown RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.195e-7■■■□□ 15
SYNE3-203ENST00000554873 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 COQ4Q9Y3A0 265 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 AP4B1Q9Y6B7 739 aa16.25■□□□□ 0.19
SYNE3-203ENST00000554873 ZNFX1Q9P2E3 1918 aaKnown RBP16.25■□□□□ 0.19
SYNE3-203ENST00000554873 SOBPA7XYQ1 873 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 XPOTO43592 962 aaKnown RBP16.24■□□□□ 0.19
SYNE3-203ENST00000554873 ENTPD3O75355 529 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 DHRS4L1P0CG22 281 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 GPC3P51654 580 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
SYNE3-203ENST00000554873 CLEC16AQ2KHT3 1053 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 EFHC2Q5JST6 749 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 BORCS5Q969J3 196 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 ST6GALNAC4Q9H4F1 302 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 SCN9AQ15858 1988 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 FUCA1P04066 466 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 C6orf222P0C671 652 aaPredicted RBP16.24■□□□□ 0.19
SYNE3-203ENST00000554873 BGNP21810 368 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 SLC1A1P43005 524 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 EIF2B2P49770 351 aaKnown RBP16.24■□□□□ 0.19
SYNE3-203ENST00000554873 SMUG1Q53HV7 270 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 SNRNP48Q6IEG0 339 aaKnown RBP16.24■□□□□ 0.19
SYNE3-203ENST00000554873 CAPN12Q6ZSI9 719 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 TTC13Q8NBP0 860 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 NT5C1BQ96P26 610 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 GBA3Q9H227 469 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 SLC38A7Q9NVC3 462 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
SYNE3-203ENST00000554873 EIF3FO00303 357 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 BAIAP3O94812 1187 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 ATP5BP06576 529 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 CYP2C9P11712 490 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 ZNF23P17027 643 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 CDH3P22223 829 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FKBP1AP62942 108 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 SPP2Q13103 211 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 CAMK2BQ13554 666 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FASTKD3Q14CZ7 662 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 RWDD4Q6NW29 188 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 LLGL2Q6P1M3 1020 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 IL31RAQ8NI17 732 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 TRPC4APQ8TEL6 797 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 HEMGNQ9BXL5 484 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 TMEM8AQ9HCN3 771 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FETUBQ9UGM5 382 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 MYOCOSA0A1B0GUC4 107 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 MEI4A8MW99 385 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 H3BNX3 289 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 QARSP47897 775 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms