RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PSD4Q8NDX1 1056 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 OR56A3Q8NH54 315 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 POC1BQ8TC44 478 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ACTRT2Q8TDY3 377 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ZNF384Q8TF68 577 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 BRI3BPQ8WY22 251 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 TFAP2BQ92481 460 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SNX22Q96L94 193 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SLC46A1Q96NT5 459 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 COLEC11Q9BWP8 271 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 STK31Q9BXU1 1019 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 TTYH3Q9C0H2 523 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MS4A7Q9GZW8 240 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 PLCB1Q9NQ66 1216 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SERHLQ9NQF3 203 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SEMA4GQ9NTN9 838 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KCTD5Q9NXV2 234 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 FRMD4BQ9Y2L6 1034 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 ZBTB32Q9Y2Y4 487 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 NEU2Q9Y3R4 380 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 RAD54BQ9Y620 910 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 SZT2Q5T011 3432 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 CACNA1IQ9P0X4 2223 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 KAT6BQ8WYB5 2073 aa1.83□□□□□ -2.12
PRPF39-208ENST00000554785 COL3A1P02461 1466 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 BLMP54132 1417 aaPredicted RBP1.83□□□□□ -2.12
PRPF39-208ENST00000554785 MTUS2Q5JR59 1369 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 PNPLA6Q8IY17 1366 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ABHD14A-ACY1A0A1B0GW23 586 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CGB1A6NKQ9 187 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 E7ENX8 843 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 APOL1O14791 398 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 YY2O15391 372 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 THAP12O43422 761 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 RBMXL2O75526 392 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 RASSF9O75901 435 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 SOAT2O75908 522 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 FGF18O76093 207 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MT-ND5P03915 603 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ANXA2P07355 339 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CHRM3P20309 590 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 GCLCP48506 637 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TOB1P50616 345 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ANXA11P50995 505 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MAPK10P53779 464 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CACNA2D1P54289 1103 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 C1QTNF8P60827 252 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MRPS35P82673 323 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 HTRA4P83105 476 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 SATB1Q01826 763 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TAP2Q03519 686 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 BOP1Q14137 746 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 IQCB1Q15051 598 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 EZH2Q15910 746 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ERCC6LQ2NKX8 1250 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ARL13BQ3SXY8 428 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 DGKKQ5KSL6 1271 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 C10orf62Q5T681 223 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 HIBCHQ6NVY1 386 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TAF2Q6P1X5 1199 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 VWA1Q6PCB0 445 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 LAYNQ6UX15 382 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 UNC13DQ70J99 1090 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 RNF44Q7L0R7 432 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CLNKQ7Z7G1 428 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 SDR16C5Q8N3Y7 309 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 VPS37AQ8NEZ2 397 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CAGE1Q8TC20 777 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MORC4Q8TE76 937 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 IPCEF1Q8WWN9 437 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 RAPGEF4Q8WZA2 1011 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 SPSB4Q96A44 273 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM125Q96AQ2 219 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 IQCDQ96DY2 449 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ARPC5LQ9BPX5 153 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 HEPHQ9BQS7 1158 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 SELENOOQ9BVL4 669 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CHST8Q9H2A9 424 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 CERS4Q9HA82 394 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ARFGAP3Q9NP61 516 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ZSCAN32Q9NX65 697 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MYO1AQ9UBC5 1043 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ITGB1BP2Q9UKP3 347 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TRPC5Q9UL62 973 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 FNDC1Q4ZHG4 1894 aaPredicted RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TNS1Q9HBL0 1735 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MYOM1P52179 1685 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 PLCH1Q4KWH8 1693 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 MROH1Q8NDA8 1641 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 NRKQ7Z2Y5 1582 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 NKTRP30414 1462 aaKnown RBP1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TMEM2Q9UHN6 1383 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TRGV11A0A075B6L2 103 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 PRAMEF33A0A0G2JMD5 474 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 A0A1W2PPC4 97 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 A0A1W2PS29 197 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 ADM5C9JUS6 153 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 TOR1BO14657 336 aa1.82□□□□□ -2.12
PRPF39-208ENST00000554785 DCLK1O15075 740 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms