RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SETD7Q8WTS6 366 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HIST1H2AHQ96KK5 128 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HIST1H2AJQ99878 128 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 H2AFJQ9BTM1 129 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ASTN2O75129 1339 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SDC4P31431 198 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GLRBP48167 497 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NNTQ13423 1086 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EIF2S3LQ2VIR3 472 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TFAP2DQ7Z6R9 452 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 DNAJB3Q8WWF6 145 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RIN2Q8WYP3 895 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EPN1Q9Y6I3 576 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 AP1M2Q9Y6Q5 423 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SLC35F4A4IF30 521 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 H0Y858 1186 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA0391O15091 583 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 KRT75O95678 551 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ELK3P41970 407 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 KIF18BQ86Y91 864 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NLGN1Q8N2Q7 840 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GPR156Q8NFN8 814 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CSGALNACT1Q8TDX6 532 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CAPSLQ8WWF8 208 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM47Q9BQJ4 181 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 AMNQ9BXJ7 453 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 RANBP17Q9H2T7 1088 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MYH2Q9UKX2 1941 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF197O14709 1029 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SIN3BO75182 1162 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SCG2P13521 617 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PXNP49023 591 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OC90Q02509 493 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GPS1Q13098 491 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PRPF38BQ5VTL8 546 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CENPPQ6IPU0 288 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ATG9AQ7Z3C6 839 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ANKS1BQ7Z6G8 1248 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OR5T3Q8NGG3 340 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 MCRS1Q96EZ8 462 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SCLYQ96I15 445 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 VPS39Q96JC1 886 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ADAM7Q9H2U9 754 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CHMP1AQ9HD42 196 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SH3GLB2Q9NR46 395 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZNHIT2Q9UHR6 403 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SLC12A8A0AV02 714 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TISP43B9A030 160 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CUTAO60888 179 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 LCA5LO95447 670 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CACNA2D1P54289 1103 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NCAPHQ15003 741 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA1211LQ6NV74 962 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 FBXO38Q6PIJ6 1188 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ADCY4Q8NFM4 1077 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 LPIN2Q92539 896 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OSMRQ99650 979 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ABCA4P78363 2273 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NACAE9PAV3 2078 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EXOC1LA0A1B0GW35 172 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 AP3B1O00203 1094 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 PER2O15055 1255 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NDUFV1P49821 464 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 DGKEP52429 567 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CXCL17Q6UXB2 119 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZCCHC10Q8TBK6 192 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 USP7Q93009 1102 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF669Q96BR6 464 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 EFHD1Q9BUP0 239 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NOS1APO75052 506 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CYP3A4P08684 503 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TFE3P19532 575 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CHRM3P20309 590 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 DYNC1I2Q13409 638 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SMYD5Q6GMV2 418 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HINT2Q9BX68 163 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZDHHC6Q9H6R6 413 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 APOBEC2Q9Y235 224 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 NARSO43776 548 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HALP42357 657 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SCN1BQ07699 218 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CDH18Q13634 790 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SSX2Q16385 188 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF808Q8N4W9 903 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 QKIQ96PU8 341 aaKnown RBP eCLIP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 OMDQ99983 421 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ARHGEF38Q9NXL2 777 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 GCNT4Q9P109 453 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SNX10Q9Y5X0 201 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SHROOM3Q8TF72 1996 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 ZSCAN5BA6NJL1 495 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM88BA6NKF7 163 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TARSP26639 723 aaKnown RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 DEFA1P59665 94 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 SGCGQ13326 291 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 HAUS6Q7Z4H7 955 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 LRCH3Q96II8 777 aa3.41□□□□□ -1.86
SYNE2-212ENST00000554584 AKAP7Q9P0M2 348 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-212ENST00000554584 CTNNAL1Q9UBT7 734 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms