RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TTC9Q92623 222 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 KIFAP3Q92845 792 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 LMBRD1Q9NUN5 540 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 DDX19AQ9NUU7 478 aaKnown RBP18.04■□□□□ 0.48
NEK9-204ENST00000554258 DNM3Q9UQ16 869 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 PCDHB5Q9Y5E4 795 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 SCN1AP35498 2009 aa18.04■□□□□ 0.48
NEK9-204ENST00000554258 C2orf78A6NCI8 922 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 CCDC169A6NNP5 214 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 LEFTY2O00292 366 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 PPEF2O14830 753 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
NEK9-204ENST00000554258 ADH1CP00326 375 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 GP1BBP13224 206 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 NCAM1P13591 858 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 PFKFB1P16118 471 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 PLCG1P19174 1290 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 CYP3A5P20815 502 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 CD6P30203 668 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 NTSR1P30989 418 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 TNFSF9P41273 254 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 UBE2HP62256 183 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 RRAGBQ5VZM2 374 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 ERICH1Q86X53 443 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 METTL23Q86XA0 190 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 THEM5Q8N1Q8 247 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 FSIP1Q8NA03 581 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 IPO4Q8TEX9 1081 aaKnown RBP18.03■□□□□ 0.48
NEK9-204ENST00000554258 TRMT2BQ96GJ1 504 aaKnown RBP18.03■□□□□ 0.48
NEK9-204ENST00000554258 NAF1Q96HR8 494 aaKnown RBP18.03■□□□□ 0.48
NEK9-204ENST00000554258 FAM117AQ9C073 453 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 GOLPH3LQ9H4A5 285 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 PLEKHA5Q9HAU0 1116 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 STK17AQ9UEE5 414 aa18.03■□□□□ 0.48
NEK9-204ENST00000554258 A0A1B0GVL5 298 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 A0A1B0GVT2 93 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 E9PMD0 336 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 XPOTO43592 962 aaKnown RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 NOL4O94818 638 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 CYP11A1P05108 521 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 NFICP08651 508 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 ADH5P11766 374 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 INAVAQ3KP66 663 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 KIAA1324Q6UXG2 1013 aaKnown RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 DCP1BQ8IZD4 617 aaKnown RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 SYT2Q8N9I0 419 aaPredicted RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 CDK5RAP3Q96JB5 506 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 ZBTB45Q96K62 511 aaPredicted RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 PYM1Q9BRP8 204 aaKnown RBP18.02■□□□□ 0.48
NEK9-204ENST00000554258 SLC6A17Q9H1V8 727 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 DSEQ9UL01 958 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 PCDHGA1Q9Y5H4 931 aa18.02■□□□□ 0.48
NEK9-204ENST00000554258 RELNP78509 3460 aa18.02■□□□□ 0.47
NEK9-204ENST00000554258 TLN1Q9Y490 2541 aaKnown RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 SLC9A3R1O14745 358 aaPredicted RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 SCAMP3O14828 347 aaKnown RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 PDE6CP51160 858 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 NDUFA8P51970 172 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 NOLC1Q14978 699 aaKnown RBP eCLIP18.01■□□□□ 0.47
NEK9-204ENST00000554258 ZBTB6Q15916 424 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 DDR2Q16832 855 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 C10orf76Q5T2E6 689 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 DCAF12L1Q5VU92 463 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 SDE2Q6IQ49 451 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 RHBDF2Q6PJF5 856 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 ZNF574Q6ZN55 896 aaPredicted RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 PHTF2Q8N3S3 785 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 IQUBQ8NA54 791 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 ZNF248Q8NDW4 579 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 RAD54LQ92698 747 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 TOE1Q96GM8 510 aaKnown RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 MYRFLQ96LU7 910 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 PLIN2Q99541 437 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 PANK2Q9BZ23 570 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 CUEDC2Q9H467 287 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 TMEM134Q9H6X4 195 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 USP25Q9UHP3 1055 aa18.01■□□□□ 0.47
NEK9-204ENST00000554258 UTP20O75691 2785 aaKnown RBP18.01■□□□□ 0.47
NEK9-204ENST00000554258 SPTBN1Q01082 2364 aaKnown RBP18■□□□□ 0.47
NEK9-204ENST00000554258 POLR2DO15514 142 aaKnown RBP18■□□□□ 0.47
NEK9-204ENST00000554258 PLA2G4BP0C869 781 aa18■□□□□ 0.47
NEK9-204ENST00000554258 CDK4P11802 303 aa18■□□□□ 0.47
NEK9-204ENST00000554258 PAX3P23760 479 aa18■□□□□ 0.47
NEK9-204ENST00000554258 SLC12A3P55017 1021 aa18■□□□□ 0.47
NEK9-204ENST00000554258 PEX3P56589 373 aa18■□□□□ 0.47
NEK9-204ENST00000554258 RPL10AP62906 217 aaKnown RBP18■□□□□ 0.47
NEK9-204ENST00000554258 ZXDBP98169 803 aa18■□□□□ 0.47
NEK9-204ENST00000554258 ZRSR1Q15695 479 aaKnown RBP18■□□□□ 0.47
NEK9-204ENST00000554258 HES3Q5TGS1 186 aa18■□□□□ 0.47
NEK9-204ENST00000554258 NUDT18Q6ZVK8 323 aa18■□□□□ 0.47
NEK9-204ENST00000554258 MIB1Q86YT6 1006 aa18■□□□□ 0.47
NEK9-204ENST00000554258 CHPFQ8IZ52 775 aa18■□□□□ 0.47
NEK9-204ENST00000554258 FMR1NBQ8N0W7 255 aaPredicted RBP18■□□□□ 0.47
NEK9-204ENST00000554258 CADM4Q8NFZ8 388 aa18■□□□□ 0.47
NEK9-204ENST00000554258 MRGPRX1Q96LB2 322 aa18■□□□□ 0.47
NEK9-204ENST00000554258 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms