RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LARP4BQ92615 738 aaKnown RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 CCDC124Q96CT7 223 aaKnown RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 C7orf26Q96N11 449 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 DHRS9Q9BPW9 319 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 FOXP3Q9BZS1 431 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 WWP1Q9H0M0 922 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 KCTD10Q9H3F6 313 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 ARMT1Q9H993 441 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 PPCSQ9HAB8 311 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 MOV10Q9HCE1 1003 aaKnown RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 CCDC177Q9NQR7 707 aaPredicted RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.91□□□□□ -0.82
SIX4-202ENST00000554079 DDX56Q9NY93 547 aaKnown RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 CNTN3Q9P232 1028 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 STRIP2Q9ULQ0 834 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 PCDHA6Q9UN73 950 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 ARIH1Q9Y4X5 557 aaPredicted RBP9.91□□□□□ -0.82
SIX4-202ENST00000554079 PCDHA8Q9Y5H6 950 aa9.91□□□□□ -0.82
SIX4-202ENST00000554079 CCDC194A0A1B0GVG4 234 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 GSTTP1A0A1W2PQM5 241 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TSPY2A6NKD2 308 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 KLF11O14901 512 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SLC22A1O15245 554 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 HOXC11O43248 304 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 KLHL2O95198 593 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SERPINA6P08185 405 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ALOX5P09917 674 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 HSPA1AP0DMV8 641 aaKnown RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 HSPA1BP0DMV9 641 aaKnown RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 CALM1P0DP23 149 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CALM2P0DP24 149 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CALM3P0DP25 149 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 GLULP15104 373 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 BDNFP23560 247 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 DCKP27707 260 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 GNL1P36915 607 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 SLC1A1P43005 524 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 KRT6CP48668 564 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 P2RX3P56373 397 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TSPY1Q01534 308 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 UBAP2LQ14157 1087 aaKnown RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 C15orf59Q2T9L4 293 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 KIF6Q6ZMV9 814 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 FIBCD1Q8N539 461 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ATL1Q8WXF7 558 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CALML4Q96GE6 196 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ZNF512BQ96KM6 892 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 UIMC1Q96RL1 719 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ADAM33Q9BZ11 813 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SHCBP1LQ9BZQ2 653 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SAYSD1Q9NPB0 183 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 OLAHQ9NV23 265 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ARMC1Q9NVT9 282 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 EXOC7Q9UPT5 735 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 MYRFQ9Y2G1 1151 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 NFASCO94856 1347 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ESYT2A0FGR8 921 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ILVBLA1L0T0 632 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ZSCAN5BA6NJL1 495 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CLDN3O15551 220 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ALX3O95076 343 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ADSSP30520 456 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 MAN1A1P33908 653 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 HSPA1LP34931 641 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SOX5P35711 763 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ADCY8P40145 1251 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 STAT1P42224 750 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CASP5P51878 434 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 IST1P53990 364 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ALDH18A1P54886 795 aaKnown RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 CDH15P55291 814 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 GNA12Q03113 381 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CEP78Q5JTW2 689 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TCHHL1Q5QJ38 904 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 PLEKHA7Q6IQ23 1121 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 FRA10AC1Q70Z53 315 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 SLC51BQ86UW2 128 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 HPS6Q86YV9 775 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 LILRA2Q8N149 483 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 CCDC33Q8N5R6 958 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 BBOF1Q8ND07 529 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 GRK7Q8WTQ7 553 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 OSCP1Q8WVF1 389 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 TRIB2Q92519 343 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 RAD54LQ92698 747 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 DNAJC19Q96DA6 116 aa9.9□□□□□ -0.82
SIX4-202ENST00000554079 ZSCAN10Q96SZ4 725 aaPredicted RBP9.9□□□□□ -0.82
SIX4-202ENST00000554079 TRPM3Q9HCF6 1732 aaPredicted RBP9.89□□□□□ -0.83
SIX4-202ENST00000554079 TOGARAM1Q9Y4F4 1720 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SFI1A8K8P3 1242 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 HAT1O14929 419 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 SNAP91O60641 907 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 MTA2O94776 668 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 ITGAXP20702 1163 aa9.89□□□□□ -0.83
SIX4-202ENST00000554079 POLR2BP30876 1174 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms