RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 A0A087X0B3 334 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 TCRBV21S2A2A0A5A6 115 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
TDP1-208ENST00000553989 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 GIPC1O14908 333 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 CLIC2O15247 247 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 KAT7O95251 611 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 ADH5P11766 374 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 PTPN1P18031 435 aaKnown RBP9.38□□□□□ -0.91
TDP1-208ENST00000553989 CDC25BP30305 580 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 MAPK8P45983 427 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 SLC6A11P48066 632 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 NOP14P78316 857 aaKnown RBP9.38□□□□□ -0.91
TDP1-208ENST00000553989 ZXDBP98169 803 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 AMPD3Q01432 767 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 BIRC3Q13489 604 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 SLC39A14Q15043 492 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 TRIM61Q5EBN2 209 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 EOGTQ5NDL2 527 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 BTBD8Q5XKL5 378 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 RASSF3Q86WH2 238 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 NELFCDQ8IXH7 590 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 KIAA1524Q8TCG1 905 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 DHX58Q96C10 678 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 CGRRF1Q99675 332 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 TTLL2Q9BWV7 592 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
TDP1-208ENST00000553989 ZNF518BQ9C0D4 1074 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 RNF38Q9H0F5 515 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 DPEP3Q9H4B8 488 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 ZDHHC4Q9NPG8 344 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 TBC1D14Q9P2M4 693 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
TDP1-208ENST00000553989 HELZP42694 1942 aaKnown RBP9.38□□□□□ -0.91
TDP1-208ENST00000553989 MYO16Q9Y6X6 1858 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 UQCRHLA0A096LP55 91 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 A0A1W2PQ27 194 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 A0A1W2PQ64 194 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 A0A1W2PQD8 194 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 TBC1D3BA6NDS4 549 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ANTXRLA6NF34 631 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 C1QTNF9BB2RNN3 333 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 SGK1O00141 431 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 CLDN5O00501 218 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 EIF3DO15371 548 aaKnown RBP eCLIP9.37□□□□□ -0.91
TDP1-208ENST00000553989 ZBTB24O43167 697 aaPredicted RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 TACC1O75410 805 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 RTN3O95197 1032 aaPredicted RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 OAS1P00973 400 aaKnown RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 CFIP05156 583 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 UQCRHP07919 91 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 C1QTNF9P0C862 333 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 YWHAQP27348 245 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 EIF2DP41214 584 aaKnown RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 GRIA2P42262 883 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ZNF165P49910 485 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ATXN3P54252 364 aaPredicted RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 CACNA2D1P54289 1103 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 IRX4P78413 519 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 GAD2Q05329 585 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 CYP24A1Q07973 514 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 LMAN2Q12907 356 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 BYSLQ13895 437 aaKnown RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 ANO4Q32M45 955 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 HSF5Q4G112 596 aaPredicted RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 PREPLQ4J6C6 727 aaPredicted RBP9.37□□□□□ -0.91
TDP1-208ENST00000553989 FAM26FQ5R3K3 315 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 LYSMD4Q5XG99 296 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 NUDT18Q6ZVK8 323 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 C12orf40Q86WS4 652 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 SFTPA1Q8IWL2 248 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 TMEFF1Q8IYR6 380 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ADGRG2Q8IZP9 1017 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 NUP93Q8N1F7 819 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 NAT16Q8N8M0 369 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 IL17RCQ8NAC3 791 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 B3GALNT2Q8NCR0 500 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 PDZD8Q8NEN9 1154 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 DEFB124Q8NES8 71 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 TRIM9Q9C026 710 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 SLC32A1Q9H598 525 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 AGPAT3Q9NRZ7 376 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ANO10Q9NW15 660 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 CHD8Q9HCK8 2581 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
TDP1-208ENST00000553989 UBE4BO95155 1302 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
TDP1-208ENST00000553989 KIAA1549LQ6ZVL6 1849 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 SPTLC2O15270 562 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 EXOC3O60645 756 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 OLFM2O95897 454 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 CST3P01034 146 aaPredicted RBP9.36□□□□□ -0.91
TDP1-208ENST00000553989 TUBB4AP04350 444 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms