RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 FUCA2Q9BTY2 467 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
RDH11-205ENST00000553816 DUSP16Q9BY84 665 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 HSD3B7Q9H2F3 369 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 NDST4Q9H3R1 872 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 UBE2TQ9NPD8 197 aaPredicted RBP8.67□□□□□ -1.02
RDH11-205ENST00000553816 ACP6Q9NPH0 428 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 HEBP1Q9NRV9 189 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 ANO10Q9NW15 660 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 FANCLQ9NW38 375 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 TAB2Q9NYJ8 693 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 WNT16Q9UBV4 365 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 TSPAN16Q9UKR8 245 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 FBXL21Q9UKT6 434 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 PCDHB4Q9Y5E5 795 aa8.67□□□□□ -1.02
RDH11-205ENST00000553816 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 BECN2A8MW95 431 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 O00370 1275 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 CYP26A1O43174 497 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 RTN3O95197 1032 aaPredicted RBP8.66□□□□□ -1.02
RDH11-205ENST00000553816 ABL1P00519 1130 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 ZDHHC11BP0C7U3 371 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 PNMA6AP0CW24 399 aaPredicted RBP8.66□□□□□ -1.02
RDH11-205ENST00000553816 CD19P15391 556 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 BRD2P25440 801 aaKnown RBP8.66□□□□□ -1.02
RDH11-205ENST00000553816 DDX6P26196 483 aaKnown RBP eCLIP8.66□□□□□ -1.02
RDH11-205ENST00000553816 AVPR2P30518 371 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 ZNF132P52740 706 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 SKOR1P84550 965 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 GCNT1Q02742 428 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TYRO3Q06418 890 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TNK2Q07912 1038 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 PDE4CQ08493 712 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 FCHO2Q0JRZ9 810 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 CETN1Q12798 172 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 STX1AQ16623 288 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 ARHGAP44Q17R89 818 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 EXOC3L4Q17RC7 722 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 GOLGA7BQ2TAP0 167 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 ANO6Q4KMQ2 910 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 SGO2Q562F6 1265 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TRIM68Q6AZZ1 485 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TTC39CQ8N584 583 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
RDH11-205ENST00000553816 FLCNQ8NFG4 579 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TTC8Q8TAM2 541 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 UBA3Q8TBC4 463 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 BPIFB1Q8TDL5 484 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 WBP2Q969T9 261 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 FOXQ1Q9C009 403 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 VPS16Q9H269 839 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 CCSER2Q9H7U1 834 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 BRD9Q9H8M2 597 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 NMUR1Q9HB89 426 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 ARHGEF3Q9NR81 526 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TDP1Q9NUW8 608 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 OSER1Q9NX31 292 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 GTSE1Q9NYZ3 720 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TRPM5Q9NZQ8 1165 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 GMIPQ9P107 970 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 MTF2Q9Y483 593 aaPredicted RBP8.66□□□□□ -1.02
RDH11-205ENST00000553816 ZNF318Q5VUA4 2279 aa8.66□□□□□ -1.02
RDH11-205ENST00000553816 TRAV19A0A0A6YYK7 116 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 A0A1W2PQH9 124 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 OTOL1A6NHN0 477 aaPredicted RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 ZNF263O14978 683 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 CHADO15335 359 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 COCHO43405 550 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 OLFM2O95897 454 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 OAS1P00973 400 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 CKMP06732 381 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 USP17L7P0C7H9 530 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 VDRP11473 427 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 HDCP19113 662 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 AVPR1AP37288 418 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 SOX9P48436 509 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 KLK7P49862 253 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 MMP16P51512 607 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 KIF11P52732 1056 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 STARD6P59095 220 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 KRT31Q15323 416 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 MLF2Q15773 248 aaPredicted RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 ZNF77Q15935 545 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 KLHL40Q2TBA0 621 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 SNX30Q5VWJ9 437 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 GBP6Q6ZN66 633 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 PIGZQ86VD9 579 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 FAM114A1Q8IWE2 563 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 AOPEPQ8N6M6 819 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 CELF5Q8N6W0 485 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 ANKRD52Q8NB46 1076 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 TTC16Q8NEE8 873 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 DEPDC1BQ8WUY9 529 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 NDRG1Q92597 394 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 CHFRQ96EP1 664 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 SLITRK1Q96PX8 696 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 FAM83CQ9BQN1 747 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms