RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 C16orf54Q6UWD8 224 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 NEK10Q6ZWH5 1172 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 CLNKQ7Z7G1 428 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 TRABD2AQ86V40 505 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ADGRG5Q8IZF4 528 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ANKRD35Q8N283 1001 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ADAMTS18Q8TE60 1221 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 RFFLQ8WZ73 363 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 CPT1BQ92523 772 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 HVCN1Q96D96 273 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 ZBTB45Q96K62 511 aaPredicted RBP4.39□□□□□ -1.71
TDP1-207ENST00000553617 HIST1H2AAQ96QV6 131 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 GPR63Q9BZJ6 419 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 UNKLQ9H9P5 680 aaKnown RBP4.39□□□□□ -1.71
TDP1-207ENST00000553617 NOD2Q9HC29 1040 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 PREBQ9HCU5 417 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 PPP4R1LQ9P1A2 415 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 KCNE5Q9UJ90 142 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 NFU1Q9UMS0 254 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 SLC45A1Q9Y2W3 748 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 DERAQ9Y315 318 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 SNX14Q9Y5W7 946 aa4.39□□□□□ -1.71
TDP1-207ENST00000553617 A0A087X0M5 115 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 A0A1B0GX30 115 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 DYTNA2CJ06 578 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 ZAR1LA6NP61 321 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 GRXCR1A8MXD5 290 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 NPIPB6E9PJ23 425 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 CCER2I3L3R5 266 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 FOXS1O43638 330 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 CER1O95813 267 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 GPANK1O95872 356 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 LMNAP02545 664 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 HLA-DOAP06340 250 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 HNRNPA1P09651 372 aaKnown RBP eCLIP4.38□□□□□ -1.71
TDP1-207ENST00000553617 EPHA3P29320 983 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 MAGEA10P43363 369 aaPredicted RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 NPTX2P47972 431 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 GATMP50440 423 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 DCAF7P61962 342 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.38□□□□□ -1.71
TDP1-207ENST00000553617 CSHL1Q14406 222 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 ACOX1Q15067 660 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 RBM20Q5T481 1227 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 SLC9C2Q5TAH2 1124 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 TCERG1LQ5VWI1 586 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 ICE2Q659A1 982 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 B3GNTL1Q67FW5 361 aaPredicted RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 DGAT2L7PQ6IED9 249 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 SPOCD1Q6ZMY3 1216 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 C4orf50Q6ZRC1 276 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 RINLQ6ZS11 566 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 PIK3AP1Q6ZUJ8 805 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 MICALCLQ6ZW33 695 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 POLNQ7Z5Q5 900 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 MAPKAPK5Q8IW41 473 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 ABRAQ8N0Z2 381 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 LRRC71Q8N4P6 559 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 USP38Q8NB14 1042 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 SNRNP27Q8WVK2 155 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 GOLGA1Q92805 767 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 DCLRE1CQ96SD1 692 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 MNTQ99583 582 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 CHODLQ9H9P2 273 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 KCND3Q9UK17 655 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 NAP1L2Q9ULW6 460 aaPredicted RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 ZFR2Q9UPR6 939 aaKnown RBP4.38□□□□□ -1.71
TDP1-207ENST00000553617 DNAJC16Q9Y2G8 782 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 DUSP10Q9Y6W6 482 aa4.38□□□□□ -1.71
TDP1-207ENST00000553617 LOC105369274A0A096LPK9 316 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 LOC102723532A0A0G2JNH3 316 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 A6NCN8 305 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SLC38A8A6NNN8 435 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 KIF28PB7ZC32 967 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 KRT38O76015 456 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 LARGE1O95461 756 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CFIP05156 583 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 ZSCAN22P10073 491 aaPredicted RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 CD6P30203 668 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 PRKAR1BP31321 381 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 TIRAPP58753 221 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 RPS7P62081 194 aaKnown RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 SF3A3Q12874 501 aaKnown RBP eCLIP4.37□□□□□ -1.71
TDP1-207ENST00000553617 MTAPQ13126 283 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 PRKG2Q13237 762 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 TUBB3Q13509 450 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 PDE1CQ14123 709 aaPredicted RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 ANKRD1Q15327 319 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 ZNF124Q15973 351 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CYP2A13Q16696 494 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 CD300EQ496F6 205 aaPredicted RBP4.37□□□□□ -1.71
TDP1-207ENST00000553617 CTXN3Q4LDR2 81 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 SPATA1Q5VX52 437 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 ATG16L1Q676U5 607 aa4.37□□□□□ -1.71
TDP1-207ENST00000553617 MAMDC4Q6UXC1 1216 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms