RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PIGNO95427 931 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 EXOSC10Q01780 885 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 OCRLQ01968 901 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 C5orf22Q49AR2 442 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ARSKQ6UWY0 536 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 KRT78Q8N1N4 520 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ZSCAN18Q8TBC5 510 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 EAF2Q96CJ1 260 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ATXN7L3BQ96GX2 97 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 BEX2Q9BXY8 128 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CDH19Q9H159 772 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 DPP3Q9NY33 737 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ABI2Q9NYB9 513 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ABCG2Q9UNQ0 655 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PCDHGA10Q9Y5H3 936 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ADGRA3Q8IWK6 1321 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PPM1BO75688 479 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 FGFR2P21802 821 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 TAGLNQ01995 201 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 C9orf84Q5VXU9 1444 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 CYB5R2Q6BCY4 276 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 THNSL1Q8IYQ7 743 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 ANKRD53Q8N9V6 530 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 PSPC1Q8WXF1 523 aaKnown RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 MAP4K1Q92918 833 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 USP13Q92995 863 aaPredicted RBP9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM92AA1XBS5 289 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 C2orf71A6NGG8 1288 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 B8ZZF3 427 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PDE8AO60658 829 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 GCNT3O95395 438 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CD4P01730 458 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CDH15P55291 814 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SQLEQ14534 574 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PTPAQ15257 358 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 USP49Q70CQ1 688 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 LILRB2Q8N423 598 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SNX31Q8N9S9 440 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ATL1Q8WXF7 558 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 RIC8AQ9NPQ8 531 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 KLHL11Q9NVR0 708 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 GNPTGQ9UJJ9 305 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 BTBD3Q9Y2F9 522 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 GRID2IPA4D2P6 1211 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PGRP06401 933 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 RASA1P20936 1047 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SFNP31947 248 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CTNNB1P35222 781 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 INTS5Q6P9B9 1019 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CYP2U1Q7Z449 544 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 HAUS6Q7Z4H7 955 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 COL23A1Q86Y22 540 aaPredicted RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SCUBE3Q8IX30 993 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TSEN34Q9BSV6 310 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 IL1RL2Q9HB29 575 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CATSPERZQ9NTU4 200 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 POTECB2RU33 542 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CDK2AP1O14519 115 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ULK1O75385 1050 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TIPRLO75663 272 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DEXIO95424 95 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 OGNP20774 298 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 BTDP43251 543 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SLC15A2Q16348 729 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PHKG1Q16816 387 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 FAM180AQ6UWF9 173 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SNX29P2Q8IUI4 249 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ATXN2LQ8WWM7 1075 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 VPS33AQ96AX1 596 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 S100PBPQ96BU1 408 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 MKRN2Q9H000 416 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ARL8BQ9NVJ2 186 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ZC3H7BQ9UGR2 993 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CASKIN1Q8WXD9 1431 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 GRM8O00222 908 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 SEC24AO95486 1093 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 RBP3P10745 1247 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 KCNJ5P48544 419 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ETV1P50549 477 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DLG4P78352 724 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 MRPS22P82650 360 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DEFA5Q01523 94 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 BTN1A1Q13410 526 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 CCDC137Q6PK04 289 aaKnown RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DNAJB7Q7Z6W7 309 aaPredicted RBP9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 BPIFB6Q8NFQ5 453 aa9.28□□□□□ -0.92
GTF2A1-203ENST00000553612 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms