RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
SRP54-203ENST00000553544 EHD2Q9NZN4 543 aa12.58□□□□□ -0.4
SRP54-203ENST00000553544 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
SRP54-203ENST00000553544 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
SRP54-203ENST00000553544 SGK1O00141 431 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PDXKO00764 312 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 KAT7O95251 611 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 TNNC2P02585 160 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 CAPNS1P04632 268 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
SRP54-203ENST00000553544 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PCSK1P29120 753 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 EIF2DP41214 584 aaKnown RBP12.57□□□□□ -0.4
SRP54-203ENST00000553544 GRIA2P42262 883 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 MAGEA11P43364 429 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PPP3CCP48454 512 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 CLDN10P78369 228 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 DPYDQ12882 1025 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 MYO1EQ12965 1108 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 DHCR24Q15392 516 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 GAB4Q2WGN9 574 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 EMC10Q5UCC4 262 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PEAR1Q5VY43 1037 aaPredicted RBP12.57□□□□□ -0.4
SRP54-203ENST00000553544 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 SLC36A4Q6YBV0 504 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 KRBA2Q6ZNG9 492 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
SRP54-203ENST00000553544 FILIP1Q7Z7B0 1213 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 OSTM1Q86WC4 334 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 KBTBD7Q8WVZ9 684 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 HPDLQ96IR7 371 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 CEP295NLQ96MC4 621 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 GDPD2Q9HCC8 539 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 MAGEC2Q9UBF1 373 aaPredicted RBP12.57□□□□□ -0.4
SRP54-203ENST00000553544 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 LAMA5O15230 3695 aa12.57□□□□□ -0.4
SRP54-203ENST00000553544 HELZP42694 1942 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 MYH10P35580 1976 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ZBTB24O43167 697 aaPredicted RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 EXOC3O60645 756 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 RHOBTB3O94955 611 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ZNF202O95125 648 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 CYP17A1P05093 508 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 SYPP08247 313 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 TNNI1P19237 187 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 GRIK1P39086 918 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 KIR2DL1P43626 348 aaPredicted RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 FAM193AP78312 1265 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 NUCB2P80303 420 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 SLC7A9P82251 487 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ZXDBP98169 803 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 RPL6Q02878 288 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 SCAPQ12770 1279 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 SLC14A1Q13336 389 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 TRIP6Q15654 476 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 SOWAHCQ53LP3 525 aaPredicted RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 FAM171BQ6P995 826 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 RHBDF2Q6PJF5 856 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 KCNV2Q8TDN2 545 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 PARD3BQ8TEW8 1205 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 CCDC127Q96BQ5 260 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 ARHGEF4Q9NR80 690 aa12.56□□□□□ -0.4
SRP54-203ENST00000553544 R3HCC1Q9Y3T6 440 aaKnown RBP12.56□□□□□ -0.4
SRP54-203ENST00000553544 TCRBV21S2A2A0A5A6 115 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 TBC1D3BA6NDS4 549 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 HCRTO43612 131 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 ADAM23O75077 832 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 ADH1CP00326 375 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 ABL1P00519 1130 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 CD59P13987 128 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 ZNF33AQ06730 810 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 PREPLQ4J6C6 727 aaPredicted RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 TRMT11Q7Z4G4 463 aaKnown RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 SFTPA1Q8IWL2 248 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 MINDY1Q8N5J2 469 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 DEFB119Q8N690 84 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 CAPN10Q9HC96 672 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 FSCN3Q9NQT6 498 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 TBC1D14Q9P2M4 693 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 TRAF3IP3Q9Y228 551 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 PI4KAP42356 2102 aa12.55□□□□□ -0.4
SRP54-203ENST00000553544 GCN1Q92616 2671 aaKnown RBP12.55□□□□□ -0.4
SRP54-203ENST00000553544 ZNF840PA6NDX5 716 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms