RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RNF225M0QZC1 329 aaPredicted RBP24.87■■□□□ 1.57
TDP1-205ENST00000553527 TBX18O95935 607 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 CALCAP01258 141 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 ZDHHC11BP0C7U3 371 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 MRE11P49959 708 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 SLC8A3P57103 927 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 CSTF1Q05048 431 aaKnown RBP24.87■■□□□ 1.57
TDP1-205ENST00000553527 KCNJ12Q14500 433 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 NCAPHQ15003 741 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 CDKAL1Q5VV42 579 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 DHX40Q8IX18 779 aaKnown RBP24.87■■□□□ 1.57
TDP1-205ENST00000553527 UBR7Q8N806 425 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 ANKRD52Q8NB46 1076 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 UBA3Q8TBC4 463 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 ATP2A3Q93084 1043 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 CBX8Q9HC52 389 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 PNPLA8Q9NP80 782 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 HESX1Q9UBX0 185 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 NUDT5Q9UKK9 219 aa24.87■■□□□ 1.57
TDP1-205ENST00000553527 A0A1W2PQH9 124 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 TLR5O60602 858 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 IRF1P10914 325 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 VDRP11473 427 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 TCF3P15923 654 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 EEF1GP26641 437 aaKnown RBP24.86■■□□□ 1.57
TDP1-205ENST00000553527 GJA4P35212 333 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 KIF11P52732 1056 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 TSSK4Q6SA08 328 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 PIGZQ86VD9 579 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 TTC30AQ86WT1 665 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 MAML2Q8IZL2 1156 aaPredicted RBP24.86■■□□□ 1.57
TDP1-205ENST00000553527 NMUR1Q9HB89 426 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 OSER1Q9NX31 292 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 NAGPAQ9UK23 515 aa24.86■■□□□ 1.57
TDP1-205ENST00000553527 TULP2O00295 520 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 SP9P0CG40 484 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 AMPD2Q01433 879 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 PDE4CQ08493 712 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 NR1H3Q13133 447 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 LRRC32Q14392 662 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 IQCB1Q15051 598 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 TCP11X2Q5H9J9 407 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 CHFRQ96EP1 664 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 CHRDQ9H2X0 955 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 UBE2TQ9NPD8 197 aaPredicted RBP24.85■■□□□ 1.57
TDP1-205ENST00000553527 SH3BP1Q9Y3L3 701 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 R4GN57 208 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 VPS13AQ96RL7 3174 aa24.85■■□□□ 1.57
TDP1-205ENST00000553527 NFATC1O95644 943 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 RARGP13631 454 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 ATP5C1P36542 298 aaKnown RBP24.84■■□□□ 1.57
TDP1-205ENST00000553527 TUBP50607 506 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 GALK1P51570 392 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 MAN2A1Q16706 1144 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 NAIF1Q69YI7 327 aaPredicted RBP24.84■■□□□ 1.57
TDP1-205ENST00000553527 DDX42Q86XP3 938 aaKnown RBP eCLIP24.84■■□□□ 1.57
TDP1-205ENST00000553527 ANKRD20A12PQ8NF67 263 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 TFAP2BQ92481 460 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 KREMEN1Q96MU8 473 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 FBRSL1Q9HCM7 1045 aaKnown RBP24.84■■□□□ 1.57
TDP1-205ENST00000553527 KIAA1257Q9ULG3 409 aa24.84■■□□□ 1.57
TDP1-205ENST00000553527 MDM4O15151 490 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 KRT5P13647 590 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 PRKCSHP14314 528 aaPredicted RBP24.83■■□□□ 1.57
TDP1-205ENST00000553527 SLC9A1P19634 815 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 TKTL1P51854 596 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 BCAT1P54687 386 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 TPM4P67936 248 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 GCNT1Q02742 428 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 GRSF1Q12849 480 aaKnown RBP eCLIP24.83■■□□□ 1.57
TDP1-205ENST00000553527 DGKKQ5KSL6 1271 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 GJB7Q6PEY0 223 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 Q6ZS52 159 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 LUZP1Q86V48 1076 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 RBBP8NLQ8NC74 664 aaPredicted RBP24.83■■□□□ 1.57
TDP1-205ENST00000553527 ZFRQ96KR1 1074 aaKnown RBP24.83■■□□□ 1.57
TDP1-205ENST00000553527 TUBGCP2Q9BSJ2 902 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 UBXN6Q9BZV1 441 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 LRRC4Q9HBW1 653 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 USP3Q9Y6I4 520 aa24.83■■□□□ 1.57
TDP1-205ENST00000553527 O00370 1275 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 SLC9A3R1O14745 358 aaPredicted RBP24.82■■□□□ 1.56
TDP1-205ENST00000553527 PAEPP09466 180 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 ZNF18P17022 549 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 CDK11BP21127 795 aaKnown RBP24.82■■□□□ 1.56
TDP1-205ENST00000553527 BRD2P25440 801 aaKnown RBP24.82■■□□□ 1.56
TDP1-205ENST00000553527 APBA1Q02410 837 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 GAS6Q14393 721 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 C10orf120Q5SQS8 335 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 FSTL4Q6MZW2 842 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 GBP6Q6ZN66 633 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 SCD5Q86SK9 330 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 ADGRG2Q8IZP9 1017 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 NDRG1Q92597 394 aaKnown RBP24.82■■□□□ 1.56
TDP1-205ENST00000553527 WBP2Q969T9 261 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 P2RY13Q9BPV8 354 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 HSD3B7Q9H2F3 369 aa24.82■■□□□ 1.56
TDP1-205ENST00000553527 GOLGA6L19H0YKK7 550 aa24.81■■□□□ 1.56
TDP1-205ENST00000553527 TRDMT1O14717 391 aaKnown RBP24.81■■□□□ 1.56
TDP1-205ENST00000553527 XPO1O14980 1071 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms