RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ARNTLO00327 626 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CHADO15335 359 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 COCHO43405 550 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 TLR5O60602 858 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ZBED1O96006 694 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ABL1P00519 1130 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CFHP08603 1231 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 PNMA6AP0CW24 399 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 GDI1P31150 447 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CLCN1P35523 988 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 RPL34P49207 117 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 GPC5P78333 572 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ARHGAP29Q52LW3 1261 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 TMEM31Q5JXX7 168 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 KLHDC10Q6PID8 442 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 SLC47A2Q86VL8 602 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF276Q8N554 614 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 STK32AQ8WU08 396 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 IRF7Q92985 503 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 PCMTD1Q96MG8 357 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CYP2S1Q96SQ9 504 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CDK5RAP1Q96SZ6 601 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ULBP1Q9BZM6 244 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CCSER2Q9H7U1 834 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ACP6Q9NPH0 428 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CNGB3Q9NQW8 809 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 ARHGEF3Q9NR81 526 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 THG1LQ9NWX6 298 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
TRAFD1-209ENST00000552896 A0A1W2PQH9 124 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 FAM86C2PA6NEL3 165 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF263O14978 683 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 FBXO21O94952 628 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 SERPINC1P01008 464 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 MBL2P11226 248 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 SOX5P35711 763 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 GPD2P43304 727 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 ACADSBP45954 432 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 PGFP49763 221 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF445P59923 1031 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 PDCLQ13371 301 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 MTF1Q14872 753 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 MLF2Q15773 248 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 PMF1Q6P1K2 205 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 DENND1BQ6P3S1 775 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 BMP8AQ7Z5Y6 402 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 SCD5Q86SK9 330 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 TADA2BQ86TJ2 420 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 RIN3Q8TB24 985 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 SH3RF2Q8TEC5 729 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 RNF38Q9H0F5 515 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 LHX5Q9H2C1 402 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 NMUR1Q9HB89 426 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 NLRC4Q9NPP4 1024 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 NAGPAQ9UK23 515 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 CEP83Q9Y592 693 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 CPQQ9Y646 472 aa12.31□□□□□ -0.44
TRAFD1-209ENST00000552896 LEFTY2O00292 366 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 TEX33O43247 280 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 SART1O43290 800 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 RALAP11233 206 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 CYP11B1P15538 503 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 RGS7P49802 495 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 DAOAP59103 153 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 YWHAGP61981 247 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 FANCCQ00597 558 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 PRKCQQ04759 706 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 GPIHBP1Q8IV16 184 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 SIX5Q8N196 739 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 MSANTD3Q96H12 275 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 NOX5Q96PH1 765 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 NACA2Q9H009 215 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 CA14Q9ULX7 337 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
TRAFD1-209ENST00000552896 KRBA1A5PL33 1030 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 GFPT2O94808 682 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 LSM8O95777 96 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 RARGP13631 454 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 LCP1P13796 627 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 GLULP15104 373 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 KRT9P35527 623 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 ATP5C1P36542 298 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms