RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 NPAS3Q8IXF0 933 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 GJD3Q8N144 294 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 NUP93Q8N1F7 819 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 TTC16Q8NEE8 873 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 ZMIZ2Q8NF64 920 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 SHC3Q92529 594 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 ERGIC2Q96RQ1 377 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 LRRC3Q9BY71 257 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 GANQ9H2C0 597 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 VIPAS39Q9H9C1 493 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 TRPC7Q9HCX4 862 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 UXTQ9UBK9 157 aaPredicted RBP10.48□□□□□ -0.73
LETMD1-234ENST00000552645 CDH7Q9ULB5 785 aa10.48□□□□□ -0.73
LETMD1-234ENST00000552645 A0A1B0GTH6 734 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 FAM170AA1A519 330 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 LOC730098B7Z3J9 87 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 O00370 1275 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 MED7O43513 233 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 GFPT2O94808 682 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 MICAL2O94851 1124 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 RTN3O95197 1032 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 FGF19O95750 216 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ASGR2P07307 311 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 LAMP2P13473 410 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 RFX1P22670 979 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ZNF132P52740 706 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 BCAT1P54687 386 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 EPHA5P54756 1037 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ARID5AQ03989 594 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TAF10Q12962 218 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 GPRIN1Q7Z2K8 1008 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 SLC47A2Q86VL8 602 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TTC30AQ86WT1 665 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CEP112Q8N8E3 955 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ANKRD52Q8NB46 1076 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 MRPS31Q92665 395 aaKnown RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 FBXO32Q969P5 355 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ZSWIM3Q96MP5 696 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 SLITRK1Q96PX8 696 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ZSWIM1Q9BR11 485 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 STK33Q9BYT3 514 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 IL21Q9HBE4 155 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CSNK1G1Q9HCP0 422 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CD320Q9NPF0 282 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 SUFUQ9UMX1 484 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CNTN6Q9UQ52 1028 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 USTQ9Y2C2 406 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 PPP2R2CQ9Y2T4 447 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TTC28Q96AY4 2481 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 BDP1A6H8Y1 2624 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 F8VZ95 297 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 PIK3R2O00459 728 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 MOSPD3O75425 235 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 RGS7P49802 495 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 BST2Q10589 180 aaKnown RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 NR1I3Q14994 352 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 STILQ15468 1287 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CNGA2Q16280 664 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TXNDC8Q6A555 127 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 PIGZQ86VD9 579 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TMEM139Q8IV31 216 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 PASD1Q8IV76 773 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 FAM71AQ8IYT1 594 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 MAB21L3Q8N8X9 362 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ZSCAN18Q8TBC5 510 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 ZNF606Q8WXB4 792 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 RSAD2Q8WXG1 361 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TRMT2BQ96GJ1 504 aaKnown RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 NAA15Q9BXJ9 866 aaKnown RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 GPR88Q9GZN0 384 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 AVENQ9NQS1 362 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TRPM5Q9NZQ8 1165 aa10.47□□□□□ -0.73
LETMD1-234ENST00000552645 CHORDC1Q9UHD1 332 aaPredicted RBP10.47□□□□□ -0.73
LETMD1-234ENST00000552645 TRIOO75962 3097 aa10.46□□□□□ -0.73
LETMD1-234ENST00000552645 TNFRSF10BO14763 440 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 SHOX2O60902 331 aaPredicted RBP10.46□□□□□ -0.74
LETMD1-234ENST00000552645 F11P03951 625 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 CFHP08603 1231 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 LCP1P13796 627 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 KRT9P35527 623 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 FAM78AQ5JUQ0 283 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 DENND1BQ6P3S1 775 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 FOXR1Q6PIV2 292 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 PARM1Q6UWI2 310 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 TMEM150AQ86TG1 271 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 RNF135Q8IUD6 432 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 MYRFLQ96LU7 910 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 CEP295NLQ96MC4 621 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 KXD1Q9BQD3 176 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 SMG9Q9H0W8 520 aaKnown RBP10.46□□□□□ -0.74
LETMD1-234ENST00000552645 FBXO44Q9H4M3 255 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 ANKZF1Q9H8Y5 726 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 LRRC4Q9HBW1 653 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 GDE1Q9NZC3 331 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 GMIPQ9P107 970 aa10.46□□□□□ -0.74
LETMD1-234ENST00000552645 NUP210Q8TEM1 1887 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms