RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ADRB2P07550 413 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 VIMP08670 466 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 UNGP13051 313 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MAP4P27816 1152 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CNGA1P29973 690 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ADSSP30520 456 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 COPB2P35606 906 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MRPS9P82933 396 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MAP2K1Q02750 393 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CYP24A1Q07973 514 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 DMP1Q13316 513 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 RIPK1Q13546 671 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MTMR1Q13613 665 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 BRDTQ58F21 947 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 FAM102BQ5T8I3 360 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 WLSQ5T9L3 541 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 DCAF15Q66K64 600 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 AADACL2Q6P093 401 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CYB5D1Q6P9G0 228 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 PAOXQ6QHF9 649 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CRELD2Q6UXH1 353 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MAEAQ7L5Y9 396 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CDH24Q86UP0 819 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 NLRX1Q86UT6 975 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 EXOC3L1Q86VI1 746 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SLC47A2Q86VL8 602 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 LRRC34Q8IZ02 419 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 C7orf61Q8IZ16 206 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MCOLN2Q8IZK6 566 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 GPD1LQ8N335 351 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 RIBC1Q8N443 379 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CCDC89Q8N998 374 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MCPH1Q8NEM0 835 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 CCHCR1Q8TD31 782 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SEMA4DQ92854 862 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 KAT5Q92993 513 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ZKSCAN4Q969J2 545 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 GRAMD1AQ96CP6 724 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 COX4I2Q96KJ9 171 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MYRFLQ96LU7 910 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 UBL7Q96S82 380 aaPredicted RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MOV10L1Q9BXT6 1211 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 BRINP2Q9C0B6 783 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MRPL47Q9HD33 250 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 KMT5AQ9NQR1 393 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 HAUS2Q9NVX0 235 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SUSD2Q9UGT4 822 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ANAPC5Q9UJX4 755 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 TPX2Q9ULW0 747 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 PCDHB2Q9Y5E7 798 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 PCDHB12Q9Y5F1 795 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 A0A1W2PQU0 124 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 DENND3A2RUS2 1198 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 KRBA1A5PL33 1030 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 GOLGA8IPA6NC78 632 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 GOLGA8JA6NMD2 632 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 YDJCA8MPS7 323 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ANKRD63C9JTQ0 380 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 O00370 1275 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 THAP12O43422 761 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PSTPIP1O43586 416 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 EXTL3O43909 919 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SNX3O60493 162 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ZBED4O75132 1171 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SUN1O94901 812 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PROSCO94903 275 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CYP1A1P04798 512 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ATF2P15336 505 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CD247P20963 164 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 FGFR4P22455 802 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 MAP2K2P36507 400 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 NPTX2P47972 431 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 KCNJ1P48048 391 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 MARCKSL1P49006 195 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 KRT17Q04695 432 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ADGRE1Q14246 886 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 MBTPS1Q14703 1052 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 STAT4Q14765 748 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PGM5Q15124 567 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 NOL9Q5SY16 702 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 SLFN12LQ6IEE8 588 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 POMZP3Q6PJE2 187 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 PPP1R21Q6ZMI0 780 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 C15orf39Q6ZRI6 1047 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 TRPM8Q7Z2W7 1104 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CBWD2Q8IUF1 395 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 RHOT1Q8IXI2 618 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 FAM20CQ8IXL6 584 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 ANKRD35Q8N283 1001 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CCDC63Q8NA47 563 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 BVESQ8NE79 360 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 AGBL3Q8NEM8 1001 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
CHMP4A-210ENST00000552620 CKAP2Q8WWK9 683 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms