RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	TFDP3	Q5H9I0	405 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	TTC27	Q6P3X3	843 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ANKS3	Q6ZW76	656 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	STRADA	Q7RTN6	431 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ANKS1B	Q7Z6G8	1248 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	CMTR2	Q8IYT2	770 aa	Known RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	DEFB106A	Q8N104	65 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	CMAS	Q8NFW8	434 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	NDRG1	Q92597	394 aa	Known RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	HSPH1	Q92598	858 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ACSF2	Q96CM8	615 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	TTPAL	Q9BTX7	342 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	HEMGN	Q9BXL5	484 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	DCLK3	Q9C098	648 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	MCOLN1	Q9GZU1	580 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	RAB6C	Q9H0N0	254 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	ARFGAP3	Q9NP61	516 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	IL23A	Q9NPF7	189 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	PRDM10	Q9NQV6	1147 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	RASAL2	Q9UJF2	1139 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	STAP1	Q9ULZ2	295 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	PCDHB5	Q9Y5E4	795 aa		13.27	□□□□□ -0.29
CACNB3-223	ENST00000552480	CARNS1	A5YM72	827 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	MDM4	O15151	490 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TTI1	O43156	1089 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TBC1D4	O60343	1298 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	ENDOD1	O94919	500 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TJP3	O95049	919 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	EFEMP2	O95967	443 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	LTF	P02788	710 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	USP17L7	P0C7H9	530 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TFE3	P19532	575 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	CYP2F1	P24903	491 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	GRIK1	P39086	918 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	PBX3	P40426	434 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	PTGIR	P43119	386 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	MAGEA11	P43364	429 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	ARSE	P51690	589 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	SMARCB1	Q12824	385 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	LLGL1	Q15334	1064 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	KCNT1	Q5JUK3	1230 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	PM20D1	Q6GTS8	502 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	SCYL2	Q6P3W7	929 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCDC137	Q6PK04	289 aa	Known RBP	13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	VSTM1	Q6UX27	236 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	HFE2	Q6ZVN8	426 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	BHLHA9	Q7RTU4	235 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	BNIPL	Q7Z465	357 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	MTERF4	Q7Z6M4	381 aa	Known RBP	13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TMEM173	Q86WV6	379 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	KCTD6	Q8NC69	237 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	C1orf54	Q8WWF1	131 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	SLCO2A1	Q92959	643 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	NT5C3B	Q969T7	300 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	IGSF21	Q96ID5	467 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	C8orf48	Q96LL4	319 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	NPY6R	Q99463	290 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	TRIM62	Q9BVG3	475 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	RAB17	Q9H0T7	212 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	EPB41L5	Q9HCM4	733 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	CHST7	Q9NS84	486 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	ABI2	Q9NYB9	513 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	RRN3	Q9NYV6	651 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	USP3	Q9Y6I4	520 aa		13.26	□□□□□ -0.29
CACNB3-223	ENST00000552480	YJEFN3	A6XGL0	299 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480		E7ENQ6	273 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	TNFRSF10B	O14763	440 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	TRIM66	O15016	1216 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	SEC31A	O94979	1220 aa	Known RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	ACR	P10323	421 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	KRT10	P13645	584 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	CDH6	P55285	790 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	PPIG	Q13427	754 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	PDK2	Q15119	407 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	CCNG2	Q16589	344 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	USP41	Q3LFD5	358 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	DCAF6	Q58WW2	860 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	RTP2	Q5QGT7	225 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	OTUD1	Q5VV17	481 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	KAZN	Q674X7	775 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	VSIG1	Q86XK7	387 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	JAML	Q86YT9	394 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	MAP7D3	Q8IWC1	876 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	RNF168	Q8IYW5	571 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	EIF1AD	Q8N9N8	165 aa	Known RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	GRK7	Q8WTQ7	553 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	C2orf15	Q8WU43	125 aa	Known RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	CASKIN2	Q8WXE0	1202 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	SEC14L1	Q92503	715 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	B3GALT6	Q96L58	329 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	ZNF558	Q96NG5	402 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	SNRNP25	Q9BV90	132 aa	Known RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	ADAM33	Q9BZ11	813 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	PLEKHA4	Q9H4M7	779 aa		13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.25	□□□□□ -0.29
CACNB3-223	ENST00000552480	UTP11	Q9Y3A2	253 aa	Known RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms