RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 F5P12259 2224 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 KANSL1LA0AUZ9 987 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ARNTLO00327 626 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ZBED1O96006 694 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 RARGP13631 454 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 UCHL3P15374 230 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 AOC1P19801 751 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 RGS7P49802 495 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 UBXN1Q04323 297 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 GOLGA8FQ08AF8 430 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 GOLGA8DPQ0D2H9 430 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 DRAP1Q14919 205 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 UBXN2BQ14CS0 331 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ITPRIPL2Q3MIP1 535 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ZSCAN23Q3MJ62 389 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 PKDCCQ504Y2 493 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 IER5LQ5T953 404 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 C1orf228Q6PIY5 440 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ZNF852Q6ZMS4 543 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 DHX40Q8IX18 779 aaKnown RBP19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ZNF606Q8WXB4 792 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 KCTD13Q8WZ19 329 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 ULBP1Q9BZM6 244 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 C8orf33Q9H7E9 229 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 PLCB1Q9NQ66 1216 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 CYLDQ9NQC7 956 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 CFAP97Q9P2B7 532 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 AJAP1Q9UKB5 411 aaPredicted RBP19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 SH3BP1Q9Y3L3 701 aa19.43■□□□□ 0.7
PRPF40B-216ENST00000552301 CAVIN2O95810 425 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 LCP1P13796 627 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 GLULP15104 373 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 AVPR2P30518 371 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 ATP5C1P36542 298 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 VCPP55072 806 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 BPIFB4P59827 614 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 TNK2Q07912 1038 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 SYCP1Q15431 976 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 MEA1Q16626 185 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 FILIP1LQ4L180 1135 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 C10orf120Q5SQS8 335 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 RSRC2Q7L4I2 434 aaKnown RBP19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 CPA6Q8N4T0 437 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 TTC8Q8TAM2 541 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 RIN3Q8TB24 985 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 SLC35F5Q8WV83 523 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 OSCP1Q8WVF1 389 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 ATP2A3Q93084 1043 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 HSFY1Q96LI6 401 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 FAM83CQ9BQN1 747 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 FOXQ1Q9C009 403 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 EBF3Q9H4W6 596 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 NMUR1Q9HB89 426 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 CNGB3Q9NQW8 809 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 ST7Q9NRC1 585 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 FAM207AQ9NSI2 230 aaPredicted RBP19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 GTSE1Q9NYZ3 720 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 CLIC5Q9NZA1 410 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 DAAM1Q9Y4D1 1078 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 WNT6Q9Y6F9 365 aa19.42■□□□□ 0.7
PRPF40B-216ENST00000552301 KIF26AQ9ULI4 1882 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 FOXN3O00409 490 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 SLC9A3R1O14745 358 aaPredicted RBP19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 YWHAGP61981 247 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 RUNX3Q13761 415 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 BTBD8Q5XKL5 378 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 TRIM68Q6AZZ1 485 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 NEK11Q8NG66 645 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 FAM3CQ92520 227 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 GOLGA1Q92805 767 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 NELL2Q99435 816 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 HSD3B7Q9H2F3 369 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 PDCL3Q9H2J4 239 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 LTB4R2Q9NPC1 389 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 ACP6Q9NPH0 428 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 DNMT3LQ9UJW3 386 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 SIT1Q9Y3P8 196 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 CEP83Q9Y592 693 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 ZNF318Q5VUA4 2279 aa19.41■□□□□ 0.7
PRPF40B-216ENST00000552301 LRRC10BA6NIK2 292 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NCAM2O15394 837 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NFATC1O95644 943 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 PNMA6AP0CW24 399 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 IRF1P10914 325 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 ARSAP15289 507 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 CD72P21854 359 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 KRT9P35527 623 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 ACADSBP45954 432 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 PGFP49763 221 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 MLLT6P55198 1093 aaPredicted RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 POLR2FP61218 127 aaKnown RBP19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 AMPD2Q01433 879 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 NR1H3Q13133 447 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 PM20D1Q6GTS8 502 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 PMF1Q6P1K2 205 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 DENND1BQ6P3S1 775 aa19.4■□□□□ 0.7
PRPF40B-216ENST00000552301 KLHDC10Q6PID8 442 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms