RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 HOXD13P35453 343 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 CASP5P51878 434 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 EPHA4P54764 986 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 PDE1BQ01064 536 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 NRG1Q02297 640 aaPredicted RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 MAP3K10Q02779 954 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 CKAP4Q07065 602 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TFCP2Q12800 502 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 CCINQ13939 588 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GRIN2CQ14957 1233 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 UBE3CQ15386 1083 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 STILQ15468 1287 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 KLHL38Q2WGJ6 581 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 SLC10A6Q3KNW5 377 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 SPDYAQ5MJ70 313 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 VARS2Q5ST30 1063 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 VWA5B1Q5TIE3 1220 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 UNC13DQ70J99 1090 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 EXOC3L1Q86VI1 746 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 APLFQ8IW19 511 aaPredicted RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GSPT2Q8IYD1 628 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 ZNF527Q8NB42 609 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TTLQ8NG68 377 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GRIN3AQ8TCU5 1115 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 SLC26A7Q8TE54 656 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 MAIP1Q8WWC4 291 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 P3H4Q92791 437 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 RRP36Q96EU6 259 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 ZNF570Q96NI8 536 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 DHRS4Q9BTZ2 278 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 FRMD8P1Q9BZ68 369 aaPredicted RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TRIM2Q9C040 744 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 SENP6Q9GZR1 1112 aaPredicted RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 POLR3BQ9NW08 1133 aaPredicted RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 ADPRHL2Q9NX46 363 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 COX16Q9P0S2 106 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 PCDHGB4Q9UN71 923 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 SOX13Q9UN79 622 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GAB2Q9UQC2 676 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 PREX1Q8TCU6 1659 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 A0A087X0M5 115 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 A0A1B0GX30 115 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 B2RBV5 119 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 HSBP1L1C9JCN9 74 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 GCOM1H8Y6P7 765 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TLR2O60603 784 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 NOL3O60936 208 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 HSF2BPO75031 334 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 LRG1P02750 347 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 FGF4P08620 206 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 GHRP10912 638 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 VEGFAP15692 232 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 CHN1P15882 459 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 EEF1A1P68104 462 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TAP2Q03519 686 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 EEF1A2Q05639 463 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 DUSP4Q13115 394 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 NNTQ13423 1086 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 RIPK1Q13546 671 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 PTPAQ15257 358 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 UGP2Q16851 508 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 MYLK3Q32MK0 819 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 EEF1A1P5Q5VTE0 462 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 RNF219Q5W0B1 726 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 ZNF852Q6ZMS4 543 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 SGMS1Q86VZ5 419 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 CCDC63Q8NA47 563 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 LINC00301Q8NCQ3 95 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 KCNG4Q8TDN1 519 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 SH3RF3Q8TEJ3 882 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 GANCQ8TET4 914 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 ATL1Q8WXF7 558 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 WASF1Q92558 559 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 GATA6Q92908 595 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 GRAMD1AQ96CP6 724 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 CYFIP2Q96F07 1278 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 LTV1Q96GA3 475 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 METTL2AQ96IZ6 378 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 RHOVQ96L33 236 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 MMS19Q96T76 1030 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 HAUS8Q9BT25 410 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TBCDQ9BTW9 1192 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 MLPHQ9BV36 600 aaPredicted RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 BTBD2Q9BX70 525 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 SLITRK6Q9H5Y7 841 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TMEM206Q9H813 350 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TUFT1Q9NNX1 390 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 NRBP2Q9NSY0 501 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 THAP1Q9NVV9 213 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 TAS2R7Q9NYW3 318 aa6.71□□□□□ -1.34
LINC02388-201ENST00000550678 NOP53Q9NZM5 478 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 ADD3Q9UEY8 706 aaKnown RBP6.71□□□□□ -1.34
LINC02388-201ENST00000550678 IL19Q9UHD0 177 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms