RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 BUB1BO60566 1050 aaPredicted RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 HSF2BPO75031 334 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 RFPL2O75678 378 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 MTA2O94776 668 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 FTCDO95954 541 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 CSH1P0DML2 217 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 CSH2P0DML3 217 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 TNNT1P13805 278 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 GPD1P21695 349 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 RFC1P35251 1148 aaPredicted RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 GTF2F1P35269 517 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPN3-207ENST00000550228 GJC1P36383 396 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 SCNN1AP37088 669 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 SSR1P43307 286 aaKnown RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 SULT1E1P49888 294 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 GNG11P61952 73 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 YWHAGP61981 247 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPN3-207ENST00000550228 TAF10Q12962 218 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 DUSP6Q16828 381 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 CDO1Q16878 200 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 TCEAL5Q5H9L2 206 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 BTBD8Q5XKL5 378 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 TRNP1Q6NT89 227 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 BHLHA9Q7RTU4 235 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 DAAM2Q86T65 1068 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 ITIH5Q86UX2 942 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 DEFB106AQ8N104 65 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 ELMOD1Q8N336 334 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 RNF10Q8N5U6 811 aaKnown RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 RXFP2Q8WXD0 754 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 IRGQQ8WZA9 623 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 EDEM1Q92611 657 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPN3-207ENST00000550228 PPP2R3CQ969Q6 453 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 FAM161BQ96MY7 647 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
GPN3-207ENST00000550228 NMUR1Q9HB89 426 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.04
GPN3-207ENST00000550228 TMEM59LQ9UK28 342 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 SCML2Q9UQR0 700 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 HCFC2Q9Y5Z7 792 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 USP3Q9Y6I4 520 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 OBSL1O75147 1896 aa8.53□□□□□ -1.04
GPN3-207ENST00000550228 SYNJ2BP-COX16A0A087WUM0 186 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 C2CD4BA6NLJ0 364 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 NCK2O43639 380 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 SPOPO43791 374 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ZMYND10O75800 440 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 NCAM1P13591 858 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 HMGA1P17096 107 aaKnown RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 IGFBP4P22692 258 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 SDC4P31431 198 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 PGFP49763 221 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 DNA2P51530 1060 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 HADHBP55084 474 aaKnown RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 YWHAZP63104 245 aaKnown RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 PITX1P78337 314 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 ATP11AP98196 1134 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 GRIN2CQ14957 1233 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 TCEAL1Q15170 157 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 C15orf59Q2T9L4 293 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 DCAF6Q58WW2 860 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 DAB2IPQ5VWQ8 1189 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 BSPRYQ5W0U4 402 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 PM20D1Q6GTS8 502 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 C11orf63Q6NUN7 778 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ELMSAN1Q6PJG2 1045 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 RSRC2Q7L4I2 434 aaKnown RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 DNAJB7Q7Z6W7 309 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 SCD5Q86SK9 330 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 HS6ST3Q8IZP7 471 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 SCML4Q8N228 414 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 MICALL1Q8N3F8 863 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 TRIM58Q8NG06 486 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ZNF592Q92610 1267 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 PSMG2Q969U7 264 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ZNF512Q96ME7 567 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 CFAP57Q96MR6 1250 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 SLITRK1Q96PX8 696 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 WDR24Q96S15 920 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 TTLL2Q9BWV7 592 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 PLEKHA4Q9H4M7 779 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 POPDC2Q9HBU9 364 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 ZNF334Q9HCZ1 680 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 ASNSD1Q9NWL6 643 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 COMMD8Q9NX08 183 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 IL37Q9NZH6 218 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 COX16Q9P0S2 106 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 IP6K2Q9UHH9 426 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 NUDT5Q9UKK9 219 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 PACSIN2Q9UNF0 486 aaPredicted RBP8.52□□□□□ -1.05
GPN3-207ENST00000550228 NAALADL1Q9UQQ1 740 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 DOCK6Q96HP0 2047 aa8.52□□□□□ -1.05
GPN3-207ENST00000550228 DENND4CQ5VZ89 1909 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms