RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.72□□□□□ -0.69
ERBB3-214ENST00000550070 KCTD6Q8NC69 237 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 REPS2Q8NFH8 660 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 HSPH1Q92598 858 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 OXNAD1Q96HP4 312 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-214ENST00000550070 TEPSINQ96N21 525 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 NMUR2Q9GZQ4 415 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 SFMBT1Q9UHJ3 866 aa10.72□□□□□ -0.69
ERBB3-214ENST00000550070 APOC4-APOC2K7ER74 178 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 APOC2P02655 101 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 INHBAP08476 426 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 RARBP10826 455 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 ZNF24P17028 368 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 HMGB2P26583 209 aaKnown RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 ASPAP45381 313 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CPA2P48052 419 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SERPINB4P48594 390 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 YWHAGP61981 247 aaKnown RBP eCLIP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SGSM1Q2NKQ1 1148 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 HSF5Q4G112 596 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 THEMIS2Q5TEJ8 643 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 LRRC74BQ6ZQY2 392 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SLC7A3Q8WY07 619 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CDHR1Q96JP9 859 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CPXM1Q96SM3 734 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 MECRQ9BV79 373 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SYNCQ9H7C4 482 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 IKBKGQ9Y6K9 419 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 RLFQ13129 1914 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 ADCY3O60266 1144 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 C1QAP02745 245 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CD19P15391 556 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SP100P23497 879 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 AP3M2P53677 418 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 MXRA7P84157 204 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CES4AQ5XG92 561 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 ZCCHC8Q6NZY4 707 aaKnown RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 RFX8Q6ZV50 586 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 ZC3H18Q86VM9 953 aaKnown RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 TRIM42Q8IWZ5 723 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 PLPP6Q8IY26 295 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 DRAXINQ8NBI3 349 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CMASQ8NFW8 434 aaPredicted RBP10.71□□□□□ -0.69
ERBB3-214ENST00000550070 CFAP61Q8NHU2 1237 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 FBXO27Q8NI29 283 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SPATA18Q8TC71 538 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SPACA7Q96KW9 195 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 PLEKHG4BQ96PX9 1271 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 TCHPQ9BT92 498 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 DLGAP2Q9P1A6 1054 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 POLIQ9UNA4 740 aa10.71□□□□□ -0.69
ERBB3-214ENST00000550070 MCF2LO15068 1137 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 NPTXRO95502 500 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 IL1BP01584 269 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 ERBB2P04626 1255 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 AMPD1P23109 780 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 MIPP30301 263 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 RFC5P40937 340 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 RAP1GAPP47736 663 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 YWHAEP62258 255 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 OCRLQ01968 901 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 FSTL1Q12841 308 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 ORC1Q13415 861 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 TRPC3Q13507 836 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 THOC5Q13769 683 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 RCN2Q14257 317 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 KCNJ11Q14654 390 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 DUOXA2Q1HG44 320 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 IRGCQ6NXR0 463 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 LCA5Q86VQ0 697 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 XYLT1Q86Y38 959 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 FNIP1Q8TF40 1166 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 CALN1Q9BXU9 219 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 XYLT2Q9H1B5 865 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 SPATS2LQ9NUQ6 558 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 COMMD8Q9NX08 183 aa10.71□□□□□ -0.7
ERBB3-214ENST00000550070 STX18Q9P2W9 335 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 ZNF214Q9UL59 606 aaPredicted RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.71□□□□□ -0.7
ERBB3-214ENST00000550070 MGAMO43451 1857 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 CXorf49A8MYA2 514 aaPredicted RBP10.7□□□□□ -0.7
ERBB3-214ENST00000550070 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 MSCO60682 206 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 TRUB2O95900 331 aaKnown RBP10.7□□□□□ -0.7
ERBB3-214ENST00000550070 CD53P19397 219 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 PGM1P36871 562 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 RPS6KA3P51812 740 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 TFAMQ00059 246 aaKnown RBP10.7□□□□□ -0.7
ERBB3-214ENST00000550070 ZNF699Q32M78 642 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 RAB6CQ53S08 254 aa10.7□□□□□ -0.7
ERBB3-214ENST00000550070 DARS2Q6PI48 645 aaKnown RBP10.7□□□□□ -0.7
ERBB3-214ENST00000550070 TREML1Q86YW5 311 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms