RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 HECTD3Q5T447 861 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 OR6B3Q8NGW1 331 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 HMGB4Q8WW32 186 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 ZFRQ96KR1 1074 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 PANK2Q9BZ23 570 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 HSPBP1Q9NZL4 362 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 BCCIPQ9P287 314 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 DEC1Q9P2X7 70 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 CHORDC1Q9UHD1 332 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 SPEGQ15772 3267 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 AKAP13Q12802 2813 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 A0A087X0B3 334 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 SPAARA0A1B0GVQ0 90 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 A0A1W2PQF6 199 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 TCRBV21S2A2A0A5A6 115 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 FAM92AA1XBS5 289 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 EIF3DO15371 548 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 HYAL3O43820 417 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 TULP3O75386 442 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZDHHC11BP0C7U3 371 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 GABRG2P18507 467 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 PDCP20941 246 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 NTSR1P30989 418 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ATICP31939 592 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 SIM1P81133 766 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 FOXK1P85037 733 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZNF33AQ06730 810 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 SLC14A1Q13336 389 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 CUL4AQ13619 759 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 PSMD6Q15008 389 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 SLC39A14Q15043 492 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 BTBD8Q5XKL5 378 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 CNNM4Q6P4Q7 775 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 HTR3DQ70Z44 454 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ARMCX6Q7L4S7 300 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 EPM2AIP1Q7L775 607 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 TMEM25Q86YD3 366 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 HDDC3Q8N4P3 179 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZNF513Q8N8E2 541 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 B3GALNT2Q8NCR0 500 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 GLIS3Q8NEA6 775 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZCCHC14Q8WYQ9 949 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 ZNF518BQ9C0D4 1074 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 LRRC27Q9C0I9 530 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 XYLT2Q9H1B5 865 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 CD248Q9HCU0 757 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 SPHK2Q9NRA0 654 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 DNAAF2Q9NVR5 837 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 KBTBD4Q9NVX7 518 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 HCN2Q9UL51 889 aa10.46□□□□□ -0.73
TRAFD1-207ENST00000550051 PCDH15Q96QU1 1955 aa10.46□□□□□ -0.74
TRAFD1-207ENST00000550051 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.74
TRAFD1-207ENST00000550051 WDFY3Q8IZQ1 3526 aa10.46□□□□□ -0.74
TRAFD1-207ENST00000550051 ATRXP46100 2492 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 A0A1W2PQD8 194 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 A8MXQ7 604 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 CLDN5O00501 218 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 OPHN1O60890 802 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ZNF217O75362 1048 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 CFIP05156 583 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 SYPP08247 313 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 CD59P13987 128 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 TNNI1P19237 187 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ATXN3P54252 364 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 TNNC1P63316 161 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 RPL6Q02878 288 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 KDSRQ06136 332 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 RING1Q06587 406 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 SNRNP35Q16560 246 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ZNF423Q2M1K9 1284 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 RAB44Q7Z6P3 723 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 BBS7Q8IWZ6 715 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 NAT16Q8N8M0 369 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 TERB1Q8NA31 727 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 RDH13Q8NBN7 331 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 FBXO32Q969P5 355 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ZNF419Q96HQ0 510 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 KCNK16Q96T55 309 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 CGRRF1Q99675 332 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 DPEP3Q9H4B8 488 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 VRTNQ9H8Y1 702 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 ZDHHC4Q9NPG8 344 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 AGPAT3Q9NRZ7 376 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 KLK13Q9UKR3 277 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 SH3BP1Q9Y3L3 701 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 DMXL2Q8TDJ6 3036 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 IGF2RP11717 2491 aa10.45□□□□□ -0.74
TRAFD1-207ENST00000550051 CACNA1EQ15878 2313 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms