RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 SCP2P22307 547 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 UQCRC1P31930 480 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 MLC1Q15049 377 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 NFE2Q16621 373 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 ODR4Q5SWX8 454 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 SFTPA1Q8IWL2 248 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 SPARTQ8N0X7 666 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 PNISRQ8TF01 805 aaKnown RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 SPSB4Q96A44 273 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 TRIM43Q96BQ3 446 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 NMD3Q96D46 503 aaKnown RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 SUCLG2Q96I99 432 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 FYTTD1Q96QD9 318 aaKnown RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 SIGLEC11Q96RL6 698 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 FOXP1Q9H334 677 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-208ENST00000549876 LPAR3Q9UBY5 353 aa5.1□□□□□ -1.59
CCDC38-208ENST00000549876 CFAP69A5D8W1 941 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 MBD3L4A6NDZ8 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-208ENST00000549876 MBD3L3A6NE82 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-208ENST00000549876 FAM227AF5H4B4 570 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 PYCARD-AS1I3L0S3 204 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 PLEKHG6Q3KR16 790 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 MINDY4Q4G0A6 757 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 CHPFQ8IZ52 775 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 MMS19Q96T76 1030 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 SACM1LQ9NTJ5 587 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 TFCP2L1Q9NZI6 479 aa5.09□□□□□ -1.59
CCDC38-208ENST00000549876 ISM1B1AKI9 464 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 PSMD9O00233 223 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 CES2O00748 559 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 FRS3O43559 492 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 SRGAP2O75044 1071 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 SCGB1D2O95969 90 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 TOMM40O96008 361 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-208ENST00000549876 THBS4P35443 961 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 TIRAPP58753 221 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC38-208ENST00000549876 LMAN2Q12907 356 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 ERV3-1Q14264 604 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 NPY5RQ15761 445 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 NXNQ6DKJ4 435 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 DEF8Q6ZN54 512 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 TCEAL8Q8IYN2 117 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 MAP4K1Q92918 833 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-208ENST00000549876 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 C1orf112Q9NSG2 853 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 USP22Q9UPT9 525 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 PAXBP1Q9Y5B6 917 aa5.08□□□□□ -1.6
CCDC38-208ENST00000549876 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 LOC102723971A0A1B0GUV8 181 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 FAM90A8PA6NJQ4 464 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 H7C4K7 107 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 CD3EAPO15446 510 aaKnown RBP5.07□□□□□ -1.6
CCDC38-208ENST00000549876 CCP110O43303 1012 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 SPRY2O43597 315 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 MT-CO3P00414 261 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 FAM90A13PP0C7W8 464 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 FAM90A24PP0C7X0 464 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 BRAFP15056 766 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 EPHA3P29320 983 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 PRKAR1BP31321 381 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 HTR6P50406 440 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
CCDC38-208ENST00000549876 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.6
CCDC38-208ENST00000549876 FMO1Q01740 532 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 CNGA2Q16280 664 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 INSCQ1MX18 579 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 ZNF750Q32MQ0 723 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 C3orf38Q5JPI3 329 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 CACHD1Q5VU97 1274 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 PTCHD4Q6ZW05 846 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 RAB11FIP4Q86YS3 637 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 MAGEB6Q8N7X4 407 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 ACRBPQ8NEB7 543 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 OSR1Q8TAX0 266 aaPredicted RBP5.07□□□□□ -1.6
CCDC38-208ENST00000549876 COL20A1Q9P218 1284 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
CCDC38-208ENST00000549876 TTC3P53804 2025 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 M0R3H8 397 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 AGPSO00116 658 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 RRP9O43818 475 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 MARCH6O60337 910 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 TLR2O60603 784 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 CNOT3O75175 753 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 RASAL1O95294 804 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 APEHP13798 732 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 ATF7P17544 494 aaPredicted RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 KLRC1P26715 233 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 RGS19P49795 217 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 DIO1P49895 249 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 LINC01465Q8N7H1 131 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 RBMXL3Q8N7X1 1067 aaKnown RBP5.06□□□□□ -1.6
CCDC38-208ENST00000549876 WDYHV1Q96HA8 205 aa5.06□□□□□ -1.6
CCDC38-208ENST00000549876 CCDC17Q96LX7 622 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms