RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 CD101Q93033 1021 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 OTUB2Q96DC9 234 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 KCNK16Q96T55 309 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 HNRNPABQ99729 332 aaKnown RBP11.04□□□□□ -0.64
CCDC38-207ENST00000549752 NACA2Q9H009 215 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 EPC1Q9H2F5 836 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 IL37Q9NZH6 218 aa11.04□□□□□ -0.64
CCDC38-207ENST00000549752 ARMCX3Q9UH62 379 aaPredicted RBP11.04□□□□□ -0.64
CCDC38-207ENST00000549752 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 E2F8A0AVK6 867 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 FAM92AA1XBS5 289 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 ADH1CP00326 375 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CCDC130P13994 396 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 ARSAP15289 507 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 DCAF17Q5H9S7 520 aaPredicted RBP11.03□□□□□ -0.64
CCDC38-207ENST00000549752 SPOPLQ6IQ16 392 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 FOXR2Q6PJQ5 311 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 TSSK4Q6SA08 328 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 PAQR9Q6ZVX9 377 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 TADA2BQ86TJ2 420 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 ACDQ96AP0 544 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CYFIP2Q96F07 1278 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 RBM12Q9NTZ6 932 aaKnown RBP11.03□□□□□ -0.64
CCDC38-207ENST00000549752 FAM49BQ9NUQ9 324 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 GMEB2Q9UKD1 530 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 SLC8A2Q9UPR5 921 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CPQQ9Y646 472 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 PLXND1Q9Y4D7 1925 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 SDK1Q7Z5N4 2213 aa11.03□□□□□ -0.64
CCDC38-207ENST00000549752 CCDC163A0A0D9SF12 145 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CHURC1-FNTBB4DL54 471 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CILPO75339 1184 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 FGFR1OPO95684 399 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 TDGF1P13385 188 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CD58P19256 250 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SDHBP21912 280 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 ADORA2BP29275 332 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 EIF2DP41214 584 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 GALK1P51570 392 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 MAP3K7CLP57077 242 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SATB1Q01826 763 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 FSTL4Q6MZW2 842 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CAMKK1Q8N5S9 505 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SUMF1Q8NBK3 374 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SCAMP5Q8TAC9 235 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CDK5RAP1Q96SZ6 601 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 RNF38Q9H0F5 515 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 HMGXB4Q9UGU5 601 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 CHORDC1Q9UHD1 332 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SMG5Q9UPR3 1016 aaKnown RBP11.02□□□□□ -0.65
CCDC38-207ENST00000549752 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 COQ4Q9Y3A0 265 aa11.02□□□□□ -0.65
CCDC38-207ENST00000549752 OTOL1A6NHN0 477 aaPredicted RBP11.01□□□□□ -0.65
CCDC38-207ENST00000549752 COCHO43405 550 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 GNA14O95837 355 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 ZDHHC11BP0C7U3 371 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 ATP5C1P36542 298 aaKnown RBP11.01□□□□□ -0.65
CCDC38-207ENST00000549752 PI4KAP42356 2102 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 ORC1Q13415 861 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 GAS6Q14393 721 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 BTBD8Q5XKL5 378 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 LAIR1Q6GTX8 287 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 Q6ZS52 159 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 CLEC20AQ6ZU45 233 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 FILIP1Q7Z7B0 1213 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 WDR5BQ86VZ2 330 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 ZMIZ2Q8NF64 920 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 RIN3Q8TB24 985 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 TMEM176AQ96HP8 235 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 HEXIM2Q96MH2 286 aaKnown RBP11.01□□□□□ -0.65
CCDC38-207ENST00000549752 SMOQ99835 787 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 UBXN6Q9BZV1 441 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 APOBEC3GQ9HC16 384 aaKnown RBP11.01□□□□□ -0.65
CCDC38-207ENST00000549752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC38-207ENST00000549752 CISHQ9NSE2 258 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 SMPD4Q9NXE4 827 aa11.01□□□□□ -0.65
CCDC38-207ENST00000549752 GMIPQ9P107 970 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms