RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ATP5OP48047 213 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 CTCFP49711 727 aaPredicted RBP11.57□□□□□ -0.56
LINC00661-204ENST00000549354 SLC8A3P57103 927 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 KDSRQ06136 332 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 STAT4Q14765 748 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 MSS51Q4VC12 460 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 TRIM72Q6ZMU5 477 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 RHOT1Q8IXI2 618 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 C12orf50Q8NA57 414 aaPredicted RBP11.57□□□□□ -0.56
LINC00661-204ENST00000549354 CXorf38Q8TB03 319 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 FAM111AQ96PZ2 611 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 RAB3IPQ96QF0 476 aaPredicted RBP11.57□□□□□ -0.56
LINC00661-204ENST00000549354 XYLT2Q9H1B5 865 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 AVENQ9NQS1 362 aaPredicted RBP11.57□□□□□ -0.56
LINC00661-204ENST00000549354 SLC17A6Q9P2U8 582 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 USH1CQ9Y6N9 552 aa11.57□□□□□ -0.56
LINC00661-204ENST00000549354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 TM4SF4P48230 202 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 PGGT1BP53609 377 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 OTUD4Q01804 1114 aaKnown RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 PCBP1Q15365 356 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 SOCS4Q8WXH5 440 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 MOCOSQ96EN8 888 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 DDX50Q9BQ39 737 aaKnown RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 RNPEPL1Q9HAU8 725 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 NRCAMQ92823 1304 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 USP34Q70CQ2 3546 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 PROSCO94903 275 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 CETN2P41208 172 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 RABGGTBP53611 331 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 CENPCQ03188 943 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 C15orf59Q2T9L4 293 aaPredicted RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 PPP1R2P3Q6NXS1 205 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 MAB21L3Q8N8X9 362 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 KCTD6Q8NC69 237 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 TCP10LQ8TDR4 215 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 ZNF75CPQ92670 426 aaPredicted RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 SLC7A6OSQ96CW6 309 aaPredicted RBP11.56□□□□□ -0.56
LINC00661-204ENST00000549354 ASB7Q9H672 318 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 DLGAP2Q9P1A6 1054 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 HEY2Q9UBP5 337 aa11.56□□□□□ -0.56
LINC00661-204ENST00000549354 SMIM35A0A1B0GVV1 85 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CYB561D2O14569 222 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TSPAN1O60635 241 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 SMIM24O75264 130 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 SMNDC1O75940 238 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 KRT36O76013 467 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TMEM191BP0C7N4 346 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ALADP13716 330 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CALB2P22676 271 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 HOXC8P31273 242 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 RGS2P41220 211 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TFAP2BQ92481 460 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 PTPRN2Q92932 1015 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CCDC124Q96CT7 223 aaKnown RBP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 VCPIP1Q96JH7 1222 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 HHIPL1Q96JK4 782 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 APBA2Q99767 749 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 VRTNQ9H8Y1 702 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 AKT3Q9Y243 479 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 MGAMO43451 1857 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 VTNP04004 478 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ARF4P18085 180 aaPredicted RBP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 PSMC1P62191 440 aaKnown RBP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 RCN1Q15293 331 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CCNG2Q16589 344 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TMEM154Q6P9G4 183 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CES3Q6UWW8 571 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ARMC2Q8NEN0 867 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 CLPTM1LQ96KA5 538 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ACAP3Q96P50 834 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 NIF3L1Q9GZT8 377 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 RPF1Q9H9Y2 349 aaKnown RBP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TTLL3Q9Y4R7 772 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 DYNC1LI2O43237 492 aaPredicted RBP11.55□□□□□ -0.56
LINC00661-204ENST00000549354 GPR32O75388 356 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 SERPINB3P29508 390 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 GLRA4Q5JXX5 417 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 PRAMEF19Q5SWL8 479 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 FNBP1LQ5T0N5 605 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 RNF220Q5VTB9 566 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ANO7Q6IWH7 933 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 UNC45BQ8IWX7 931 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 C12orf29Q8N999 325 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 FBXO36Q8NEA4 188 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 STK32AQ8WU08 396 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 MCUR1Q96AQ8 359 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 TRIM11Q96F44 468 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 ARL8BQ9NVJ2 186 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 SEPT10Q9P0V9 454 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 HMGXB4Q9UGU5 601 aa11.55□□□□□ -0.56
LINC00661-204ENST00000549354 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms