RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 BTBD8Q5XKL5 378 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 OR6B2Q6IFH4 312 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 DCUN1D2Q6PH85 259 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 KLHDC10Q6PID8 442 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF662Q6ZS27 426 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 GPR149Q86SP6 731 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 TMEM139Q8IV31 216 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 WDTC1Q8N5D0 677 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 TTC9BQ8N6N2 239 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 RNF139Q8WU17 664 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 RFFLQ8WZ73 363 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM149B1Q96BN6 582 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF653Q96CK0 615 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 MCRS1Q96EZ8 462 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 PCDHB18PQ96TA0 734 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 C11orf70Q9BRQ4 267 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 ULBP1Q9BZM6 244 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 CRISPLD1Q9H336 500 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 POPDC2Q9HBU9 364 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 MTMR10Q9NXD2 777 aa10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 MAGED2Q9UNF1 606 aaPredicted RBP10.25□□□□□ -0.77
SMARCD1-206ENST00000549274 SIGLEC16A6NMB1 481 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 BTNL10A8MVZ5 291 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 TMCO5BA8MYB1 307 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CCL16O15467 120 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 BEST1O76090 585 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 LTFP02788 710 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 SPATA31D3P0C874 917 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 KRT3P12035 628 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 HMGA1P17096 107 aaKnown RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 MSNP26038 577 aaKnown RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 GBP1P32455 592 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 NOS2P35228 1153 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 GALCP54803 685 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 YWHAGP61981 247 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 YWHAZP63104 245 aaKnown RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CCZ1BP86790 482 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CCZ1P86791 482 aaPredicted RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 TAF10Q12962 218 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 NNTQ13423 1086 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 ADGRE1Q14246 886 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 ACAP1Q15027 740 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CCDC142Q17RM4 750 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 ACBD5Q5T8D3 534 aaPredicted RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 OLFML1Q6UWY5 402 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 MMS22LQ6ZRQ5 1243 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 SPATA31D4Q6ZUB0 917 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 DDX42Q86XP3 938 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 XYLT1Q86Y38 959 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 FNIP1Q8TF40 1166 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 MYLIPQ8WY64 445 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 ADAM7Q9H2U9 754 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 SPTLC3Q9NUV7 552 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CNOT8Q9UFF9 292 aaKnown RBP10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CD207Q9UJ71 328 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 NENFQ9UMX5 172 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 PCDHA13Q9Y5I0 950 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 CDH23Q9H251 3354 aa10.24□□□□□ -0.77
SMARCD1-206ENST00000549274 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 TULP2O00295 520 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 PJA2O43164 708 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 PAPSS1O43252 624 aaPredicted RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 DAB1O75553 588 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SOAT2O75908 522 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 GLP2RO95838 553 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 F9P00740 461 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 CALCAP01258 141 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 CYP1A2P05177 515 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 RHOP08100 348 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 CFHP08603 1231 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 USP17L7P0C7H9 530 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 ZDHHC11BP0C7U3 371 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 ABCB4P21439 1286 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 GABRR2P28476 465 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SSTR3P32745 418 aaPredicted RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 ARHGAP25P42331 645 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 GPR15P49685 360 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 HADHBP55084 474 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 IFRD2Q12894 506 aaPredicted RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 TCEAL1Q15170 157 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SKIV2LQ15477 1246 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 AAK1Q2M2I8 961 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 RARS2Q5T160 578 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 PLEKHA7Q6IQ23 1121 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SND1Q7KZF4 910 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 RSRC2Q7L4I2 434 aaKnown RBP10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 GPIHBP1Q8IV16 184 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SCUBE3Q8IX30 993 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 KIAA1958Q8N8K9 716 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 HLA-CQ95604 372 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 E2F7Q96AV8 911 aa10.23□□□□□ -0.77
SMARCD1-206ENST00000549274 SERPINB11Q96P15 392 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms