RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 PPP1R36Q96LQ0 422 aa12.89□□□□□ -0.35
SLC38A1-206ENST00000549049 VPS11Q9H270 941 aa12.89□□□□□ -0.35
SLC38A1-206ENST00000549049 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
SLC38A1-206ENST00000549049 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
SLC38A1-206ENST00000549049 MAFGO15525 162 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 PSMG1O95456 288 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 VHLP40337 213 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 NEK3P51956 506 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 CA9Q16790 459 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ZBTB8OSQ8IWT0 167 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.88□□□□□ -0.355e-6■■■■■ 55.7
SLC38A1-206ENST00000549049 TEKT4Q8WW24 435 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 CPB2Q96IY4 423 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 TSC22D3Q99576 134 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ELOVL4Q9GZR5 314 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 MSCO60682 206 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ZMPSTE24O75844 475 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 DLDP09622 509 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 GNAT1P11488 350 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 PTPRAP18433 802 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ABCG1P45844 678 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 RTP1P59025 263 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 LRRC74BQ6ZQY2 392 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 SCUBE3Q8IX30 993 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ACO2Q99798 780 aaKnown RBP12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 C20orf27Q9GZN8 174 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 MINDY3Q9H8M7 445 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
SLC38A1-206ENST00000549049 PRR5-ARHGAP8B1AHC4 643 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 APOC4-APOC2K7ER74 178 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TM9SF1O15321 606 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 WFS1O76024 890 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 LSM8O95777 96 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TRUB2O95900 331 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 APOC2P02655 101 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 HOXC6P09630 235 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 KCNA4P22459 653 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 ARHGAP8P85298 464 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TNFAIP1Q13829 316 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 C1orf146Q5VVC0 180 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CES4AQ5XG92 561 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 RGS9BPQ6ZS82 235 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CCNJLQ8IV13 435 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SLC44A1Q8WWI5 657 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 STRIP2Q9ULQ0 834 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 MTO1Q9Y2Z2 717 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SORBS2O94875 1100 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CSH1P0DML2 217 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CSH2P0DML3 217 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 KCNA3P22001 575 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SESN2P58004 480 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SLC25A3Q00325 362 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PPP2R5DQ14738 602 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 ATF7IP2Q5U623 682 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TEX2Q8IWB9 1127 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PHC3Q8NDX5 983 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SAR1AQ9NR31 198 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 KRT37O76014 449 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PDE5AO76074 875 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TFE3P19532 575 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 GTF2A2P52657 109 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 YWHAZP63104 245 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PRKD1Q15139 912 aaPredicted RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 EML3Q32P44 896 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 TRNP1Q6NT89 227 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 KBTBD2Q8IY47 623 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 PTCD3Q96EY7 689 aaKnown RBP12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 ZNF333Q96JL9 665 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CNTN6Q9UQ52 1028 aa12.87□□□□□ -0.35
SLC38A1-206ENST00000549049 CCDC78A2IDD5 438 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 LACTBL1A8MY62 500 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 SNRPAP09012 282 aaKnown RBP12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 OSBPP22059 807 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 FKBP1CQ5VVH2 108 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 SLC26A11Q86WA9 606 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
SLC38A1-206ENST00000549049 ZNF483Q8TF39 744 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms